Evidence map›Paper›PMID 24895634›Full record

ArticleBioMed research international2014

Identification of virulence factors genes in Escherichia coli isolates from women with urinary tract infection in Mexico.

Daniela A López-Banda, Erika M Carrillo-Casas, Margarita Leyva-Leyva, Gabriel Orozco-Hoyuela, Ángel H Manjarrez-Hernández, Sara Arroyo-Escalante, David Moncada-Barrón, Silvia Villanueva-Recillas, Juan Xicohtencatl-Cortes, Rigoberto Hernández-Castro

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 80 citations in OpenAlex.

  1. Global prevalence of fluoroquinolone resistance inFrontiers in cellular and infection microbiology · 2026
    Pooled it
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  4. CAUTIon - not all UTIs are the same.Nature reviews. Urology · 2025
    Review
  5. The Role ofVeterinary sciences · 2025
    Article
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  11. Correlation of biofilm formation, virulence factors, and phylogenetic groups amongJournal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Possible Dissemination ofFrontiers in microbiology · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Daniela A López-BandaDepartment of Ecology of Pathogen Agents, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
Erika M Carrillo-CasasDepartment of Molecular Biology and Histocompatibility, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
Margarita Leyva-LeyvaDepartment of Molecular Biology and Histocompatibility, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.ORCID 0000-0002-8162-7336
Gabriel Orozco-HoyuelaInstitute of Cell Physiology, Universidad Nacional Autónoma de México, 04510 Coyoacán, DF, Mexico.
Ángel H Manjarrez-HernándezDepartment of Public Health, Universidad Nacional Autónoma de México, 04510 Coyoacán, DF, Mexico.
Sara Arroyo-EscalanteDepartment of Molecular Biology and Histocompatibility, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
David Moncada-BarrónClinical Laboratory, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
Silvia Villanueva-RecillasClinical Laboratory, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
Juan Xicohtencatl-CortesDepartment of Infectology, Hospital Infantil de México "Federico Gómez", 06720 Cuauhtémoc, DF, Mexico.
Rigoberto Hernández-CastroDepartment of Ecology of Pathogen Agents, Hospital General "Dr. Manuel Gea González", 14080 Tlalpan, DF, Mexico.
Hospital General Dr. Manuel Gea Gonzalez · MXUniversidad Nacional Autónoma de México · MXHospital Infantil de México Federico Gómez · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

E coli isolates (108) from Mexican women, clinically diagnosed with urinary tract infection, were screened to identify virulence genes, phylogenetic groups, and antibiotic resistance. Isolates were identified by MicroScan4 system; additionally, the minimum inhibitory concentration (MIC) was assessed. The phylogenetic groups and 16 virulence genes encoding adhesins, toxins, siderophores, lipopolysaccharide (LPS), and invasins were identified by PCR. Phylogenetic groups distribution was as follows: B1 9.3%, A 30.6%, B2 55.6%, and D 4.6%. Virulence genes prevalence was ecp 98.1%, fimH 86.1%, traT 77.8%, sfa/focDE 74.1%, papC 62%, iutA 48.1%, fyuA 44.4%, focG 2.8%, sfaS 1.9%, hlyA 7.4%, cnf-1 6.5%, cdt-B 0.9%, cvaC 2.8%, ibeA 2.8%, and rfc 0.9%. Regarding antimicrobial resistance it was above 50% to ampicillin/sulbactam, ampicillin, piperacillin, trimethoprim/sulfamethoxazole, ciprofloxacin, and levofloxacin. Uropathogenic E. coli clustered mainly in the pathogenic phylogenetic group B2. The isolates showed a high presence of siderophores and adhesion genes and a low presence of genes encoding toxins. The high frequency of papC gene suggests that these isolates have the ability to colonize the kidneys. High resistance to drugs considered as first choice treatment such as trimethoprim/sulfamethoxazole and fluoroquinolones was consistently observed.

Indexed as

Genes, BacterialAdultDrug Resistance, MicrobialDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsFemaleHumansMexicoPhylogenyPolymerase Chain ReactionUrinary Tract InfectionsVirulence FactorsVirulence Factors

Identifiers

PMID24895634
PMCPMC4026957
OpenAlexW2164739851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.