Evidence map›Paper›PMID 24895130›Full record

ArticleThe Journal of biological chemistry2014

Novel function of the Fanconi anemia group J or RECQ1 helicase to disrupt protein-DNA complexes in a replication protein A-stimulated manner.

Joshua A Sommers, Taraswi Banerjee, Twila Hinds, Bingbing Wan, Marc S Wold, Ming Lei, Robert M Brosh

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Joshua A SommersFrom the Laboratory of Molecular Gerontology, Biomedical Research Center, NIA, National Institutes of Health, Baltimore, Maryland 21224.
Taraswi BanerjeeFrom the Laboratory of Molecular Gerontology, Biomedical Research Center, NIA, National Institutes of Health, Baltimore, Maryland 21224.
Twila HindsFrom the Laboratory of Molecular Gerontology, Biomedical Research Center, NIA, National Institutes of Health, Baltimore, Maryland 21224.
Bingbing Wanthe Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109, and.
Marc S Woldthe Department of Biochemistry, Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242.
Ming Leithe Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109, and.
Robert M BroshFrom the Laboratory of Molecular Gerontology, Biomedical Research Center, NIA, National Institutes of Health, Baltimore, Maryland 21224, broshr@mail.nih.gov.
National Institutes of Health · USUniversity of Michigan–Ann Arbor · USUniversity of Iowa · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
Roles Of DNA Helicases In Pathways Required For Maintenance Of Genomic StabilityZIAAG000741 · NIA · NATIONAL INSTITUTE ON AGING · PI BROSH, ROBERT · 2009 to 2025
$7.6M
Fanconi Anemia PathwayZIAAG000753 · NIA · NATIONAL INSTITUTE ON AGING · PI BROSH, ROBERT · 2009 to 2025
$4.3M
Intramural NIH HHS
6 · The paper itself

Abstract

Understanding how cellular machinery deals with chromosomal genome complexity is an important question because protein bound to DNA may affect various cellular processes of nucleic acid metabolism. DNA helicases are at the forefront of such processes, yet there is only limited knowledge how they remodel protein-DNA complexes and how these mechanisms are regulated. We have determined that representative human RecQ and Fe-S cluster DNA helicases are potently blocked by a protein-DNA interaction. The Fanconi anemia group J (FANCJ) helicase partners with the single-stranded DNA-binding protein replication protein A (RPA) to displace BamHI-E111A bound to duplex DNA in a specific manner. Protein displacement was dependent on the ATPase-driven function of the helicase and unique properties of RPA. Further biochemical studies demonstrated that the shelterin proteins TRF1 and TRF2, which preferentially bind the telomeric repeat found at chromosome ends, effectively block FANCJ from unwinding the forked duplex telomeric substrate. RPA, but not the Escherichia coli single-stranded DNA-binding protein or shelterin factor Pot1, stimulated FANCJ ejection of TRF1 from the telomeric DNA substrate. FANCJ was also able to displace TRF2 from the telomeric substrate in an RPA-dependent manner. The stimulation of helicase-catalyzed protein displacement is also observed with the DNA helicase RECQ1, suggesting a conserved functional interaction of RPA-interacting helicases. These findings suggest that partnerships between RPA and interacting human DNA helicases may greatly enhance their ability to dislodge proteins bound to duplex DNA, an activity that is likely to be highly relevant to their biological roles in DNA metabolism.

Indexed as

Amino Acid SubstitutionBase SequenceBasic-Leucine Zipper Transcription FactorsDeoxyribonuclease BamHIDNAExodeoxyribonucleasesFanconi Anemia Complementation Group ProteinsHumansMacromolecular SubstancesNucleic Acid ConformationProtein BindingRecombinant ProteinsRecQ HelicasesReplication Protein ASubstrate SpecificityTelomeric Repeat Binding Protein 1BACH1 protein, humanBasic-Leucine Zipper Transcription FactorsDeoxyribonuclease BamHIDNAExodeoxyribonucleasesFanconi Anemia Complementation Group ProteinsMacromolecular SubstancesRecombinant ProteinsRecQ HelicasesRECQL protein, humanReplication Protein ARPA1 protein, humanTelomeric Repeat Binding Protein 1Werner Syndrome HelicaseWRN protein, humanDNA-binding ProteinDNA HelicaseDNA RepairFANCJFanconi AnemiaGenetic DiseaseGenomic InstabilityRECQ1Replication Protein ATelomere

Identifiers

PMID24895130
PMCPMC4106313
OpenAlexW2091304642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.