Evidence map›Paper›PMID 24891738›Full record

ArticleIndian journal of microbiology2014

Isolation and Characterization of the PKAr Gene From a Plant Pathogen, Curvularia lunata.

T Liu, B C Ma, J M Hou, Y H Zuo

Abstract read
In one paragraph

Article in Indian journal of microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

T LiuInstitute of Plant Pathology and Applied Microbiology, Heilongjiang Bayi Agricultural University, Daqing, 163319 Heilongjiang People's Republic of China ; State Key Laboratory of Crop Stress Biology in Arid Regions, Northwest A & F University, Yangling, 712100 Shaanxi People's Republic of China.
B C MaInstitute of Plant Pathology and Applied Microbiology, Heilongjiang Bayi Agricultural University, Daqing, 163319 Heilongjiang People's Republic of China.
J M HouInstitute of Plant Pathology and Applied Microbiology, Heilongjiang Bayi Agricultural University, Daqing, 163319 Heilongjiang People's Republic of China.
Y H ZuoInstitute of Plant Pathology and Applied Microbiology, Heilongjiang Bayi Agricultural University, Daqing, 163319 Heilongjiang People's Republic of China ; State Key Laboratory of Crop Stress Biology in Arid Regions, Northwest A & F University, Yangling, 712100 Shaanxi People's Republic of China.
Heilongjiang Bayi Agricultural University · CNNorthwest A&F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By using EST database from a full-length cDNA library of Curvularia lunata, we have isolated a 2.9 kb cDNA, termed PKAr. An ORF of 1,383 bp encoding a polypeptide of 460 amino acids with molecular weight 50.1 kDa, (GeneBank Acc. No. KF675744) was cloned. The deduced amino acid sequence of the PKAr shows 90 and 88 % identity with cAMP-dependent protein kinase A regulatory subunit from Alternaria alternate and Pyrenophora tritici-repentis Pt-1C-BFP, respectively. Database analysis revealed that the deduced amino acid sequence of PKAr shares considerable similarity with that of PKA regulatory subunits in other organisms, particularly in the conserved regions. No introns were identified within the 1,383 bp of ORF compared with PKAr genomic DNA sequence. Southern blot indicated that PKAr existed as a single copy per genome. The mRNA expression level of PKAr in different development stages were demonstrated using real-time quantitative PCR. The results showed that the level of PKAr expression was highest in vegetative growth mycelium, which indicated it might play an important role in the vegetative growth of C. lunata. These results provided a fundamental supporting research on the function of PKAr in plant pathogen, C. lunata.

Indexed as

Curvularia lunataPKArReal-time PCRSouthern blot

Identifiers

PMID24891738
PMCPMC4039719
OpenAlexW1974760087

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.