Evidence map›Paper›PMID 24891612›Full record

ArticlePlant physiology2014

Auxin Input Pathway Disruptions Are Mitigated by Changes in Auxin Biosynthetic Gene Expression in Arabidopsis.

Gretchen M Spiess, Amanda Hausman, Peng Yu, Jerry D Cohen, Rebekah A Rampey, Bethany K Zolman

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Auxin Metabolism in Plants.Cold Spring Harbor perspectives in biology · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Control of Endogenous Auxin Levels in Plant Root Development.International journal of molecular sciences · 2017
    Review
  12. Article
  13. Article
  14. Auxin and Cellular Elongation.Plant physiology · 2016
    Article
  15. Article
  16. Article
  17. Auxin activity: Past, present, and future.American journal of botany · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Gretchen M SpiessDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.).
Amanda HausmanDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.).
Peng YuDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.).
Jerry D CohenDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.).
Rebekah A RampeyDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.).
Bethany K ZolmanDepartment of Biology, University of Missouri, St. Louis, Missouri 63121 (G.M.S., A.H., B.K.Z.);Department of Horticulture Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (P.Y., J.D.C.); andDepartment of Biology, Harding University, Searcy, Arkansas 72149 (R.A.R.) zolmanb@umsl.edu.
University of Missouri–St. Louis · USUniversity of Minnesota · USHarding University Main Campus · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin is a phytohormone involved in cell elongation and division. Levels of indole-3-acetic acid (IAA), the primary auxin, are tightly regulated through biosynthesis, degradation, sequestration, and transport. IAA is sequestered in reversible processes by adding amino acids, polyol or simple alcohols, or sugars, forming IAA conjugates, or through a two-carbon elongation forming indole-3-butyric acid. These sequestered forms of IAA alter hormone activity. To gain a better understanding of how auxin homeostasis is maintained, we have generated Arabidopsis (Arabidopsis thaliana) mutants that combine disruptions in the pathways, converting IAA conjugates and indole-3-butyric acid to free IAA. These mutants show phenotypes indicative of low auxin levels, including delayed germination, abnormal vein patterning, and decreased apical dominance. Root phenotypes include changes in root length, root branching, and root hair growth. IAA levels are reduced in the cotyledon tissue but not meristems or hypocotyls. In the combination mutants, auxin biosynthetic gene expression is increased, particularly in the YUCCA/Tryptophan Aminotransferase of Arabidopsis1 pathway, providing a feedback mechanism that allows the plant to compensate for changes in IAA input pathways and maintain cellular homeostasis.

Identifiers

PMID24891612
PMCPMC4081324
OpenAlexW2037120089

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.