Evidence map›Paper›PMID 24891605›Full record

ArticleThe Journal of cell biology2014

Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants.

Xiao Zhou, Katja Graumann, Lennart Wirthmueller, Jonathan D G Jones, Iris Meier

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 86 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Xiao ZhouDepartment of Molecular Genetics, The Ohio State University, Columbus, OH 43210.
Katja GraumannDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford OX3 OBP, England, UK.
Lennart WirthmuellerThe Sainsbury Laboratory, Norwich NR4 7UH, England, UK.
Jonathan D G JonesThe Sainsbury Laboratory, Norwich NR4 7UH, England, UK.
Iris MeierDepartment of Molecular Genetics, The Ohio State University, Columbus, OH 43210 meier.56@osu.edu.
Sainsbury Laboratory · GBThe Ohio State University · USOxford Brookes University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/K009176/1
6 · The paper itself

Abstract

Although a plethora of nuclear envelope (NE) transmembrane proteins (NETs) have been identified in opisthokonts, plant NETs are largely unknown. The only known NET homologues in plants are Sad1/UNC-84 (SUN) proteins, which bind Klarsicht/ANC-1/Syne-1 homology (KASH) proteins. Therefore, de novo identification of plant NETs is necessary. Based on similarities between opisthokont KASH proteins and the only known plant KASH proteins, WPP domain-interacting proteins, we used a computational method to identify the KASH subset of plant NETs. Ten potential plant KASH protein families were identified, and five candidates from four of these families were verified for their NE localization, depending on SUN domain interaction. Of those, Arabidopsis thaliana SINE1 is involved in actin-dependent nuclear positioning in guard cells, whereas its paralogue SINE2 contributes to innate immunity against an oomycete pathogen. This study dramatically expands our knowledge of plant KASH proteins and suggests that plants and opisthokonts have recruited different KASH proteins to perform NE regulatory functions.

Indexed as

ActinsAgrobacterium tumefaciensAmino Acid SequenceArabidopsisArabidopsis ProteinsCell NucleusComputational BiologyGenome, PlantMembrane ProteinsMolecular Sequence DataNicotianaNuclear EnvelopeNuclear ProteinsProtein BindingProtein Structure, TertiaryProteomicsActinsArabidopsis ProteinsMembrane ProteinsNuclear ProteinsRNA-Binding Proteinssad1 protein, Arabidopsis

Identifiers

PMID24891605
PMCPMC4050730
OpenAlexW2000088438

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.