Evidence map›Paper›PMID 24891503›Full record

ArticleThe Journal of biological chemistry2014

Roles for trafficking and O-linked glycosylation in the turnover of model cell surface proteins.

Darya Karabasheva, Nelson B Cole, Julie G Donaldson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Serotonin 5-HTScientific reports · 2019
    Article
  4. Article
  5. A systematic study of modulation of ADAM-mediated ectodomain shedding by site-specific O-glycosylation.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Darya KarabashevaFrom the Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
Nelson B ColeFrom the Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892 ncole@mail.nih.gov.
Julie G DonaldsonFrom the Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
National Institutes of Health · US

Funding

Pathways and mechanisms of clathrin-independent endocytosisZIAHL006060 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI DONALDSON, JULIE G · 2010 to 2018
$5.7M
Intramural NIH HHSNHLBI NIH HHS HL006060
6 · The paper itself

Abstract

Proteins targeted to the plasma membrane (PM) of cells are degraded at different rates. Sorting motifs contained within the cytoplasmic domains of transmembrane proteins, post-translational modifications (e.g. ubiquitination), and assembly into multiprotein or protein-lipid complexes all may affect the efficiency of endocytosis and recycling and influence the delivery to degradative compartments. Using the SNAP-tag labeling system, we examined the turnover of a model PM protein, the α chain of the interleukin-2 receptor (Tac). The surface lifetimes of SNAP-Tac fusions were influenced by their mode of entry into cells (clathrin-dependent versus clathrin-independent), their orientation in the PM (transmembrane versus glycosylphosphatidylinositol-anchored), and ubiquitination in their cytosolic domains. In addition, shedding of SNAP-Tac into the medium was greatly influenced by its O-linked glycosylation status. For a number of PM proteins, delivery to lysosomes and ectodomain shedding represent distinct parallel mechanisms to determine protein half-life.

Indexed as

Models, BiologicalGlycosylationHeLa CellsHumansInterleukin-2 Receptor alpha SubunitIsotope LabelingLysosomesProtein Processing, Post-TranslationalProtein TransportIL2RA protein, humanInterleukin-2 Receptor alpha SubunitEndocytosisLysosomePlasma MembraneSheddingTrafficking

Identifiers

PMID24891503
PMCPMC4094058
OpenAlexW2062206634

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.