Evidence map›Paper›PMID 24891164›Full record

ArticlePlant, cell & environment2014

Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice.

Madoka Ayano, Takahiro Kani, Mikiko Kojima, Hitoshi Sakakibara, Takuya Kitaoka, Takeshi Kuroha, Rosalyn B Angeles-Shim, Hidemi Kitano, Keisuke Nagai, Motoyuki Ashikari

Open access · hybridAbstract read
In one paragraph

Article in Plant, cell & environment, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 167 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Genome-wide association study to identify candidate genes for submergence tolerance during rice seed germination.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Characterization of the gibberellic oxidase geneFrontiers in plant science · 2024
    Article
  15. Article
  16. Review
  17. Article
  18. Progress in the study of functional genes related to direct seeding of rice.Molecular breeding : new strategies in plant improvement · 2023
    Review
  19. Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Madoka AyanoBioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi, 464-8601.
Takahiro Kani
Mikiko Kojima
Hitoshi Sakakibara
Takuya Kitaoka
Takeshi Kuroha
Rosalyn B Angeles-Shim
Hidemi Kitano
Keisuke Nagai
Motoyuki Ashikari
Nagoya University · JPRIKEN Center for Sustainable Resource Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under flooded conditions, the leaves and internodes of deepwater rice can elongate above the water surface to capture oxygen and prevent drowning. Our previous studies showed that three major quantitative trait loci (QTL) regulate deepwater-dependent internode elongation in deepwater rice. In this study, we investigated the age-dependent internode elongation in deepwater rice. We also investigated the relationship between deepwater-dependent internode elongation and the phytohormone gibberellin (GA) by physiological and genetic approach using a QTL pyramiding line (NIL-1 + 3 + 12). Deepwater rice did not show internode elongation before the sixth leaf stage under deepwater condition. Additionally, deepwater-dependent internode elongation occurred on the sixth and seventh internodes during the sixth leaf stage. These results indicate that deepwater rice could not start internode elongation until the sixth leaf stage. Ultra-performance liquid chromatography tandem mass-spectrometry (UPLC-MS/MS) method for the phytohormone contents showed a deepwater-dependent GA1 and GA4 accumulation in deepwater rice. Additionally, a GA inhibitor abolished deepwater-dependent internode elongation in deepwater rice. On the contrary, GA feeding mimicked internode elongation under ordinary growth conditions. However, mutations in GA biosynthesis and signal transduction genes blocked deepwater-dependent internode elongation. These data suggested that GA biosynthesis and signal transduction are essential for deepwater-dependent internode elongation in deepwater rice.

Indexed as

Gene Expression Regulation, PlantSignal TransductionChromatography, High Pressure LiquidGibberellinsOryzaOxygenPlant Growth RegulatorsPlant LeavesPlant ProteinsQuantitative Trait LociTandem Mass SpectrometryTriazolesWaterGibberellinsOxygenPlant Growth RegulatorsPlant ProteinsTriazolesuniconazoleWatergibberellin

Identifiers

PMID24891164
PMCPMC4282320
OpenAlexW2154721008

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.