Evidence map›Paper›PMID 24890856›Full record

ArticleDatabase : the journal of biological databases and curation2014

aglgenes, A curated and searchable database of archaeal N-glycosylation pathway components.

Noa Godin, Jerry Eichler

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Noa GodinDepartment of Life Sciences, Ben Gurion University of the Negev, P.O. Box 653, Beersheva 84105, Israel.
Jerry EichlerDepartment of Life Sciences, Ben Gurion University of the Negev, P.O. Box 653, Beersheva 84105, Israel jeichler@bgu.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whereas N-glycosylation is a posttranslational modification performed across evolution, the archaeal version of this protein-processing event presents a degree of diversity not seen in either bacteria or eukarya. Accordingly, archaeal N-glycosylation relies on a large number of enzymes that are often species-specific or restricted to a select group of species. As such, there is a need for an organized platform upon which amassing information about archaeal glycosylation (agl) genes can rest. Accordingly, the aglgenes database provides detailed descriptions of experimentally characterized archaeal N-glycosyation pathway components. For each agl gene, genomic information, supporting literature and relevant external links are provided at a functional intuitive web-interface designed for data browsing. Routine updates ensure that novel experimental information on genes and proteins contributing to archaeal N-glycosylation is incorporated into aglgenes in a timely manner. As such, aglgenes represents a specialized resource for sharing validated experimental information online, providing support for workers in the field of archaeal protein glycosylation. Database URL: www.bgu.ac.il/aglgenes.

Indexed as

Databases, GeneticDatabases, ProteinData MiningGenes, ArchaealArchaeaArchaeal ProteinsGlycosylationMolecular Sequence AnnotationSearch EngineSoftwareArchaeal Proteins

Identifiers

PMID24890856
PMCPMC4207220

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.