Evidence map›Paper›PMID 24889424›Full record

ArticleEnvironmental microbiology2015

A genomic island integrated into recA of Vibrio cholerae contains a divergent recA and provides multi-pathway protection from DNA damage.

Rita A Rapa, Atiqul Islam, Leigh G Monahan, Ankur Mutreja, Nicholas Thomson, Ian G Charles, Harold W Stokes, Maurizio Labbate

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Exploring Mobile Genetic Elements in Vibrio cholerae.Genome biology and evolution · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Rita A Rapaithree Institute, University of Technology, PO Box 123 Broadway, Sydney, NSW, 2007, Australia; Department of Medical and Molecular Biosciences, University of Technology, Sydney, NSW, Australia.
Atiqul Islam
Leigh G Monahan
Ankur Mutreja
Nicholas Thomson
Ian G Charles
Harold W Stokes
Maurizio Labbate
University of Technology Sydney · AUWellcome Sanger Institute · GB

Funding

Wellcome Trust 098051
6 · The paper itself

Abstract

Lateral gene transfer (LGT) has been crucial in the evolution of the cholera pathogen, Vibrio cholerae. The two major virulence factors are present on two different mobile genetic elements, a bacteriophage containing the cholera toxin genes and a genomic island (GI) containing the intestinal adhesin genes. Non-toxigenic V. cholerae in the aquatic environment are a major source of novel DNA that allows the pathogen to morph via LGT. In this study, we report a novel GI from a non-toxigenic V. cholerae strain containing multiple genes involved in DNA repair including the recombination repair gene recA that is 23% divergent from the indigenous recA and genes involved in the translesion synthesis pathway. This is the first report of a GI containing the critical gene recA and the first report of a GI that targets insertion into a specific site within recA. We show that possession of the island in Escherichia coli is protective against DNA damage induced by UV-irradiation and DNA targeting antibiotics. This study highlights the importance of genetic elements such as GIs in the evolution of V. cholerae and emphasizes the importance of environmental strains as a source of novel DNA that can influence the pathogenicity of toxigenic strains.

Indexed as

Amino Acid SequenceBacterial AdhesionBase SequenceCholeraCholera ToxinDNA DamageDNA-Directed DNA PolymeraseDNA RepairEscherichia coliEscherichia coli ProteinsGene Transfer, HorizontalGenomic IslandsHumansMolecular Sequence DataRec A RecombinasesRecombination, GeneticCholera ToxinDNA-Directed DNA PolymeraseDNA polymerase V, E coliEscherichia coli ProteinsRec A RecombinasesVirulence Factors

Identifiers

PMID24889424
PMCPMC4405046
OpenAlexW1502575557

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.