Evidence map›Paper›PMID 24889181›Full record

ArticleClinical and translational science2014

CYP2C9 allelic variants and frequencies in a pediatric sickle cell disease cohort: implications for NSAIDs pharmacotherapy.

Cheedy Jaja, Niren Patel, Stuart A Scott, Robert Gibson, Abdullah Kutlar

Open access · greenAbstract read
In one paragraph

Article in Clinical and translational science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Pharmacogenetic Gene-Drug Associations in Pediatric Burn and Surgery Patients.Journal of burn care & research : official publication of the American Burn Association · 2022
    Article
  3. Effect of CYP2C9 Polymorphisms on the Pharmacokinetics of Indomethacin During Pregnancy.European journal of drug metabolism and pharmacokinetics · 2019
    Article
  4. Use of anti-inflammatory analgesics in sickle-cell disease.Journal of clinical pharmacy and therapeutics · 2017
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Cheedy JajaCollege of Nursing, University of Cincinnati, Cincinnati, Ohio, USA.
Niren Patel
Stuart A Scott
Robert Gibson
Abdullah Kutlar
Georgia Regents Medical Center · USAugusta University · USNew York Genome Center · USUniversity of Cincinnati Medical Center · US

Funding

Training/Education CoreP20MD003383 · NIMHD · AUGUSTA UNIVERSITY · PI TUAN, DOROTHY Y · 2009 to 2013
$6.8M
The Pharmacogenomic Control of Clopidogrel Response in Acute Coronary SyndromesK23GM104401 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SCOTT, STUART ALEXANDER · 2013 to 2016
$778k
Pharmacogenetic Optimization of Analgesic Prescribing in Sickle Cell DiseaseK01NR012465 · NINR · AUGUSTA UNIVERSITY · PI JAJA, CHEEDY · 2011 to 2013
$282k
NIGMS NIH HHS K23 GM104401NIMHD NIH HHS P20 MD003383NINR NIH HHS 1K01NR012465NINR NIH HHS K01 NR012465
6 · The paper itself

Abstract

Nonsteroidal anti-inflammatory drugs (NSAIDs) used to treat pain in patients with sickle cell disease (SCD) are metabolized by the CYP2C9 enzyme. Racial differences in CYP2C9 allele frequencies impact NSAIDs efficacy and safety. We determined the frequencies of CYP2C9 alleles in an African American pediatric SCD cohort. Genomic DNA was isolated from blood samples of 30 patients aged between 7 and 17 years. Genotyping of nine CYP2C9 alleles (*1,*2, *3, *4, *5, *6, *8, *11, and *13) was performed using restriction fragment length polymorphism-PCR assays and the Tag-It™ Mutation Detection System. The wild type *1 allele frequency was 0.850. The most common variant allele detected was CYP2C9*8 (0.067). The combined frequency of the *2, *5, *6, *8, and *11 variants was 0.151. Seventy percent of the study cohort were predicted extensive metabolizers (*1/*1) and 30% were intermediate metabolizers due mainly to the *1/*8 genotype. Analysis of CYP2C9 using an expanded assay panel facilitated improved classification of predicted drug metabolic phenotypes in our cohort. However, the pharmacokinetic effects of the CYP2C9*5,*6,*8, and *11 alleles on NSAIDs metabolism has not been evaluated and underscores the need for studies on substrate-specific effects of variant alleles common in populations with genetic susceptibility to SCD.

Indexed as

AllelesAdolescentAnemia, Sickle CellAnti-Inflammatory Agents, Non-SteroidalChildCohort StudiesCytochrome P-450 CYP2C9DemographyFemaleGene FrequencyGenotypeHumansPhenotypeAnti-Inflammatory Agents, Non-SteroidalCYP2C9 protein, humanCytochrome P-450 CYP2C9CYP2C9genotypingNSAIDspharmacogeneticssickle cell disease

Identifiers

PMID24889181
PMCPMC4213284
OpenAlexW1480160358

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.