Evidence map›Paper›PMID 24886974›Full record

ArticlePloS one2014

Transcription factors involved in prostate gland adaptation to androgen deprivation.

Rafaela Rosa-Ribeiro, Umar Nishan, Ramon Oliveira Vidal, Guilherme Oliveira Barbosa, Leonardo Oliveira Reis, Carlos Lenz Cesar, Hernandes F Carvalho

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Rafaela Rosa-RibeiroDepartment of Structural and Functional Biology, State University of Campinas, Campinas, São Paulo, Brazil.
Umar NishanDepartment of Structural and Functional Biology, State University of Campinas, Campinas, São Paulo, Brazil.
Ramon Oliveira VidalLaboratory of Bioinformatics, National Center for Research on Energy and Materials, Campinas, São Paulo, Brazil.
Guilherme Oliveira BarbosaDepartment of Structural and Functional Biology, State University of Campinas, Campinas, São Paulo, Brazil.
Leonardo Oliveira ReisDivision of Urology, State University of Campinas, Campinas, São Paulo, Brazil.
Carlos Lenz CesarDepartment of Quantum Physics, State University of Campinas, Campinas, São Paulo, Brazil; National Institute of Photonics Applied to Cell Biology (INFABiC), State University of Campinas, Campinas, São Paulo, Brazil.
Hernandes F CarvalhoDepartment of Structural and Functional Biology, State University of Campinas, Campinas, São Paulo, Brazil; National Institute of Photonics Applied to Cell Biology (INFABiC), State University of Campinas, Campinas, São Paulo, Brazil.
Universidade Estadual de Campinas (UNICAMP) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Androgens regulate prostate physiology, and exert their effects through the androgen receptor. We hypothesized that androgen deprivation needs additional transcription factors to orchestrate the changes taking place in the gland after castration and for the adaptation of the epithelial cells to the androgen-deprived environment, ultimately contributing to the origin of castration-resistant prostate cancer. This study was undertaken to identify transcription factors that regulate gene expression after androgen deprivation by castration (Cas). For the sake of comparison, we extended the analysis to the effects of administration of a high dose of 17β-estradiol (E2) and a combination of both (Cas+E2). We approached this by (i) identifying gene expression profiles and enrichment terms, and by searching for transcription factors in the derived regulatory pathways; and (ii) by determining the density of putative transcription factor binding sites in the proximal promoter of the 10 most up- or down-regulated genes in each experimental group in comparison to the controls Gapdh and Tbp7. Filtering and validation confirmed the expression and localized EVI1 (Mecom), NFY, ELK1, GATA2, MYBL1, MYBL2, and NFkB family members (NFkB1, NFkB2, REL, RELA and RELB) in the epithelial and/or stromal cells. These transcription factors represent major regulators of epithelial cell survival and immaturity as well as an adaptation of the gland as an immune barrier in the absence of functional stimulation by androgens. Elk1 was expressed in smooth muscle cells and was up-regulated after day 4. Evi1 and Nfy genes are expressed in both epithelium and stroma, but were apparently not affected by androgen deprivation.

Indexed as

AndrogensAnimalsBinding SitesDown-RegulationEpithelial CellsFluorescent Antibody TechniqueGene Expression ProfilingGene Expression Regulation, NeoplasticHumansKineticsMalePromoter Regions, GeneticProstateProtein BindingRats, WistarReproducibility of ResultsAndrogensTranscription Factors

Identifiers

PMID24886974
PMCPMC4041569
OpenAlexW2086432607

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.