Evidence map›Paper›PMID 24886914›Full record

ArticlePloS one2014

The two main forms of histiocytic sarcoma in the predisposed Flatcoated retriever dog display variation in gene expression.

Kim M Boerkamp, Frank G van Steenbeek, Louis C Penning, Marian J A Groot Koerkamp, Dik van Leenen, Manon Vos-Loohuis, Guy C M Grinwis, Gerard R Rutteman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kim M BoerkampFaculty of Veterinary Medicine, Department of Clinical Sciences Companion Animals, Utrecht University, Utrecht, The Netherlands.
Frank G van SteenbeekFaculty of Veterinary Medicine, Department of Clinical Sciences Companion Animals, Utrecht University, Utrecht, The Netherlands.
Louis C PenningFaculty of Veterinary Medicine, Department of Clinical Sciences Companion Animals, Utrecht University, Utrecht, The Netherlands.
Marian J A Groot KoerkampMolecular Cancer Research, University Medical Centre Utrecht, Utrecht, The Netherlands.
Dik van LeenenMolecular Cancer Research, University Medical Centre Utrecht, Utrecht, The Netherlands.
Manon Vos-LoohuisFaculty of Veterinary Medicine, Department of Clinical Sciences Companion Animals, Utrecht University, Utrecht, The Netherlands.
Guy C M GrinwisFaculty of Veterinary Medicine, Department of Pathobiology, Utrecht University, Utrecht, The Netherlands.
Gerard R RuttemanFaculty of Veterinary Medicine, Department of Clinical Sciences Companion Animals, Utrecht University, Utrecht, The Netherlands.
Utrecht University · NLUniversity Medical Center Utrecht · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Examination of gene functions in specific tumor types improves insight in tumorigenesis and helps design better treatments. Due to the rarity of histiocytic/dendritic cell sarcoma in humans, it is difficult to accrue such knowledge. Therefore, comparative research of these cancers in predisposed dog breeds, such as the Flatcoated retriever, can be of value. Histiocytic sarcoma in the dog can be grouped into a soft tissue- and visceral form. The soft tissue form at first is localized, while the visceral form progresses more quickly to a terminal state, which might be related to variations in gene expression. Microarray analyses were performed on fresh-frozen tissue from Flatcoated retrievers with either soft tissue- or visceral histiocytic sarcoma. Expression differences of ten most significantly differentially expressed genes were validated with quantitative real-time PCR (q PCR) analyses. Q PCR analyses confirmed the significantly aberrant expression of three of the selected genes: C6 was up-regulated; CLEC12A and CCL5 were down-regulated in the visceral histiocytic sarcoma compared to the soft tissue form. The findings of our study indicate that these two forms of histiocytic sarcoma in the dog display a variation in gene expression and warrant analysis of functional changes in the expression of those genes in these rare sarcomas in man.

Indexed as

Genetic Predisposition to DiseaseAnimalsBase SequenceDNA PrimersDog DiseasesDogsGene Expression ProfilingHistiocytic SarcomaReal-Time Polymerase Chain ReactionDNA Primers

Identifiers

PMID24886914
PMCPMC4041757
OpenAlexW2082273086

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.