Evidence map›Paper›PMID 24886084›Full record

ArticleBMC plant biology2014

Deletions of the SACPD-C locus elevate seed stearic acid levels but also result in fatty acid and morphological alterations in nitrogen fixing nodules.

Jason D Gillman, Minviluz G Stacey, Yaya Cui, Howard R Berg, Gary Stacey

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Article
  3. A novel type of Brassica napus with higher stearic acid in seeds developed through genome editing of BnaSAD2 family.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Bioengineering of Soybean Oil and Its Impact on Agronomic Traits.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Review
  10. Article
  11. TILLING-by-SequencingInternational journal of molecular sciences · 2021
    Article
  12. Article
  13. Improving soybean seed oil without poor agronomics.Journal of experimental botany · 2020
    Article
  14. Article
  15. Molecular mapping and genomics of soybean seed protein: a review and perspective for the future.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Fast neutron-induced structural rearrangements at a soybean NAP1 locus result in gnarled trichomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jason D GillmanUSDA-ARS, University of Missouri-Columbia, 205 Curtis Hall, Columbia MO 65211, USA. Jason.Gillman@ars.usda.gov.
Minviluz G Stacey
Yaya Cui
Howard R Berg
Gary Stacey
University of Missouri · USDonald Danforth Plant Science Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSoybean (Glycine max) seeds are the primary source of edible oil in the United States. Despite its widespread utility, soybean oil is oxidatively unstable. Until recently, the majority of soybean oil underwent chemical hydrogenation, a process which also generates trans fats. An alternative to chemical hydrogenation is genetic modification of seed oil through identification and introgression of mutant alleles. One target for improvement is the elevation of a saturated fat with no negative cardiovascular impacts, stearic acid, which typically constitutes a minute portion of seed oil (~3%).

resultsWe examined radiation induced soybean mutants with moderately increased stearic acid (10-15% of seed oil, ~3-5 X the levels in wild-type soybean seeds) via comparative whole genome hybridization and genetic analysis. The deletion of one SACPD isoform encoding gene (SACPD-C) was perfectly correlated with moderate elevation of seed stearic acid content. However, SACPD-C deletion lines were also found to have altered nodule fatty acid composition and grossly altered morphology. Despite these defects, overall nodule accumulation and nitrogen fixation were unaffected, at least under laboratory conditions.

conclusionsAlthough no yield penalty has been reported for moderate elevated seed stearic acid content in soybean seeds, our results demonstrate that genetic alteration of seed traits can have unforeseen pleiotropic consequences. We have identified a role for fatty acid biosynthesis, and SACPD activity in particular, in the establishment and maintenance of symbiotic nitrogen fixation.

Indexed as

Gene DeletionNitrogen FixationAmino Acid SequenceChromosome SegregationChromosomes, PlantComparative Genomic HybridizationCrosses, GeneticEthyl MethanesulfonateFatty AcidsGene Expression Regulation, PlantGenes, PlantGenetic LociGlycine maxMolecular Sequence DataNeutron DiffractionPhenotypeEthyl MethanesulfonateFatty AcidsPlant ProteinsSoybean Oilstearic acidStearic Acids

Identifiers

PMID24886084
PMCPMC4058718
OpenAlexW2111674697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.