Evidence map›Paper›PMID 24885635›Full record

ArticleBMC genomics2014

MicroRNA profiling of rats with ochratoxin A nephrotoxicity.

Qiu Dai, Jue Zhao, Xiaozhe Qi, Wentao Xu, Xiaoyun He, Mingzhang Guo, Harsh Dweep, Wen-Hsing Cheng, Yunbo Luo, Kai Xia and 2 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in BMC genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. miRNA-141-5p Affects the Levels of Neutrophil Elastase in Preeclampsia by Regulating MAPK1.Maternal-fetal medicine (Wolters Kluwer Health, Inc.) · 2022
    Article
  6. Article
  7. Review
  8. Functional Annotation of MicroRNAs Using Existing Resources.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  9. Review
  10. Article
  11. Risk assessment of ochratoxin A in food.EFSA journal. European Food Safety Authority · 2020
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Toxicology research · 2016
    Article
  19. Combination of metagenomics and culture-based methods to study the interaction between ochratoxin a and gut microbiota.Toxicological sciences : an official journal of the Society of Toxicology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Qiu Dai
Jue Zhao
Xiaozhe Qi
Wentao XuLaboratory of food safety and molecular biology, College of Food Science and Nutritional Engineering, China Agricultural University, 302 box, No,17, Qinghua East Rd, Beijing, Haidian District 100083, P R China. xuwentao@cau.edu.cn.
Xiaoyun He
Mingzhang Guo
Harsh Dweep
Wen-Hsing Cheng
Yunbo Luo
Kai Xia
Norbert Gretz
Kunlun Huang
China Agricultural University · CNHeidelberg University · DEMississippi State University · USUniversity Hospital Heidelberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNephrotoxicity is the most prominent one among the various toxicities of ochratoxin A (OTA). MicroRNAs (miRNAs) are small non-coding RNAs that have an impact on a wide range of biological processes by regulating gene expression at post-transcriptional level or protein systhesis level. The objective of this study is to analyze miRNA profiling in the kidneys of rats gavaged with OTA.

resultsTo profile miRNAs in the kidneys of rats with OTA nephrotoxicity, high-throughput sequencing and bioinformatics approaches were applied to analyze the miRNAs in the kidney of rats following OTA treatment. A total of 409 known miRNAs and 8 novel miRNAs were identified in the kidney and the levels of the novel miRNAs were varied in response to different doses of OTA. Expression of miR-129, miR-130a, miR-130b, miR-141, miR-218b and miR-3588 were uniquely suppressed in mid dose but then elevated in high dose, with opposite expression to their target genes. The expression pattern was closely related with the "MAPK signaling pathway". Dicer1 and Drosha were significantly suppressed, indicating an impairment of miRNA biogenesis in response to OTA.

conclusionsThe abrogation of miRNA maturation process suggests a new target of OTA toxicity. Moreover, the identification of the differentially expressed miRNAs provides us a molecular insight into the nephrtoxicity of OTA.

Indexed as

Gene Expression ProfilingAnimalsHigh-Throughput Nucleotide SequencingKidneyMAP Kinase Signaling SystemMicroRNAsOchratoxinsPolymerase Chain ReactionRatsMicroRNAsochratoxin AOchratoxins

Identifiers

PMID24885635
PMCPMC4035064
OpenAlexW2066280649

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.