Evidence map›Paper›PMID 24882733›Full record

ArticleBiochimica et biophysica acta2014

Ceramide-lipid interactions studied by MD simulations and solid-state NMR.

Bercem Dutagaci, Johanna Becker-Baldus, José D Faraldo-Gómez, Clemens Glaubitz

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Lipid Self-Assemblies under the Atomic Force Microscope.International journal of molecular sciences · 2021
    Review
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Bercem DutagaciInstitute of Biophysical Chemistry, J.W. Goethe-University, Max-von-Laue-Str. 9, 60438 Frankfurt, Germany.
Johanna Becker-BaldusInstitute of Biophysical Chemistry, J.W. Goethe-University, Max-von-Laue-Str. 9, 60438 Frankfurt, Germany.
José D Faraldo-GómezTheoretical Molecular Biophysics Section, National Heart, Lung & Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Clemens GlaubitzInstitute of Biophysical Chemistry, J.W. Goethe-University, Max-von-Laue-Str. 9, 60438 Frankfurt, Germany. Electronic address: glaubitz@em.uni-frankfurt.de.
Goethe University Frankfurt · DENational Institutes of Health · US

Funding

Intramural NIH HHS Z99 HL999999
6 · The paper itself

Abstract

Ceramides play a key modulatory role in many cellular processes, which results from their effect on the structure and dynamics of biological membranes. In this study, we investigate the influence of C16-ceramide (C16) on the biophysical properties of DMPC lipid bilayers using solid-state NMR and atomistic molecular dynamics (MD) simulations. MD simulations and NMR measurements were carried out for a pure DMPC bilayer and for a 20% DMPC-C16 mixture. Calculated key structural properties, namely area per lipid, chain order parameters, and mass density profiles, indicate that C16 has an ordering effect on the DMPC bilayer. Furthermore, the simulations predict that specific hydrogen-bonds form between DMPC and C16 molecules. Multi-nuclear solid-state NMR was used to verify these theoretical predictions. Chain order parameters extracted from (13)C(1)H dipole couplings were measured for both lipid and ceramide and follow the trend suggested by the MD simulations. Furthermore, (1)H-MAS NMR experiments showed a direct contact between ceramide and lipids.

Indexed as

Molecular Dynamics SimulationCeramidesDimyristoylphosphatidylcholineLipid BilayersMagnetic Resonance SpectroscopyCeramidesDimyristoylphosphatidylcholineLipid BilayersN-palmitoylsphingosineCeramideDMPCLipid raftMAS NMRMD simulation

Identifiers

PMID24882733
PMCPMC4137758
OpenAlexW2070520713

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.