Evidence map›Paper›PMID 24879800›Full record

ArticleThe Journal of infectious diseases2014

Geographical distribution and risk association of human papillomavirus genotype 52-variant lineages.

Chuqing Zhang, Jong-Sup Park, Magdalena Grce, Samantha Hibbitts, Joel M Palefsky, Ryo Konno, Karen K Smith-McCune, Lucia Giovannelli, Tang-Yuan Chu, María Alejandra Picconi and 17 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
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  10. Frequency ofIranian journal of pathology · 2024
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  15. Genetic and Epigenetic Variations of HPV52 in Cervical Precancer.International journal of molecular sciences · 2021
    Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Chuqing ZhangDepartment of Microbiology.
Jong-Sup ParkDepartment of Obstetrics and Gynecology, Seoul St. Mary's Hospital, The Catholic University of Korea, Seoul, Republic of Korea.
Magdalena GrceDivision of Molecular Medicine, Rudjer Boskovic Institute, Zagreb, Croatia.
Samantha HibbittsHPV Research Group, Cancer and Genetics Research Institute, School of Medicine, Cardiff University, United Kingdom.
Joel M PalefskyDepartment of Medicine.
Ryo KonnoDepartment of Obstetrics and Gynecology, Jichi Medical University, Saitama Medical Center, Japan.
Karen K Smith-McCuneDepartment of Obstetrics, Gynecology, and Reproductive Sciences Helen Diller Family Comprehensive Cancer Center.
Lucia GiovannelliSezione di Microbiologia, Dipartimento di Scienze per la Promozione della Salute, Azienda Ospedaliera Universitaria Policlinico P. Giaccone, Palermo.
Tang-Yuan ChuDepartment of Obstetrics and Gynecology, Buddhist Tzu Chi General Hospital, Institute of Medical Sciences, Tzu Chi University, Hualien, Taiwan.
María Alejandra PicconiServicio Virus Oncogénicos, Departamento Virología, Instituto Nacional de Enfermedades Infecciosas, ANLIS Carlos G. Malbrán, Buenos Aires, Argentina.
Patricia Piña-SánchezUnidad de Investigación Médica en Enfermedades Oncológicas, Hospital de Oncología, CMN Siglo XXI, México DF.
Wannapa Settheetham-IshidaDepartment of Physiology, Faculty of Medicine, Khon Kaen University, Thailand.
Francois CoutléeDépartement de Microbiologie et Infectiologie, Centre Hospitalier de l'Université de Montréal, Canada.
Federico De MarcoLaboratory of Virology, Regina Elena National Cancer Institute, Rome, Italy.
Yin-Ling WooDepartment of Obstetrics and Gynecology, Faculty of Medicine UM Cancer Research Institute, University of Malaya, Malaysia.
Wendy C S HoDepartment of Microbiology.
Martin C S WongSchool of Public Health and Primary Care, Faculty of Medicine, Chinese University of Hong Kong.
Mike Z ChirenjeDepartment of Obstetrics and Gynecology, University of Zimbabwe, Harare.
Tsitsi MagureDepartment of Obstetrics and Gynecology, University of Zimbabwe, Harare.
Anna-Barbara MoscickiHelen Diller Family Comprehensive Cancer Center Department of Pediatrics, University of California-San Francisco.
Ivan SabolDivision of Molecular Medicine, Rudjer Boskovic Institute, Zagreb, Croatia.
Alison N FianderHPV Research Group, Cancer and Genetics Research Institute, School of Medicine, Cardiff University, United Kingdom.
Zigui ChenAlbert Einstein College of Medicine, Bronx, New York.
Martin C W ChanDepartment of Microbiology.
Tak-Hong CheungDepartment of Obstetrics and Gynecology, Prince of Wales Hospital, Hong Kong Special Administrative Region, China.
Robert D BurkAlbert Einstein College of Medicine, Bronx, New York.
Paul K S ChanDepartment of Microbiology.

Funding

Natural History of HPV Infection to NeoplasiaR37CA051323 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MOSCICKI, ANNA-BARBARA · 2005 to 2014
$15.4M
PERSISTENT HUMAN PAPILLOMAVIRUS IN WOMEN AT RISK FOR CERVIX CANCERU01CA078527 · NCI · YESHIVA UNIVERSITY · PI BURK, ROBERT D · 2003 to 2018
$8.6M
NCI NIH HHS R37 CA051323NCI NIH HHS U01 CA078527
6 · The paper itself

Abstract

Human papillomavirus (HPV) genotype 52 is commonly found in Asian cases of cervical cancer but is rare elsewhere. Analysis of 611 isolates collected worldwide revealed a remarkable geographical distribution, with lineage B predominating in Asia (89.0% vs 0%-5.5%; P(corrected) < .001), whereas lineage A predominated in Africa, the Americas, and Europe. We propose that the name "Asian lineage" be used to denote lineage B, to signify this feature. Preliminary analysis suggested a higher disease risk for lineage B, although ethnogeographical confounders could not be excluded. Further studies are warranted to verify whether the reported high attribution of disease to HPV52 in Asia is due to the high prevalence of lineage B.

Indexed as

Topography, MedicalAdolescentAdultAgedAged, 80 and overFemaleGenotypeGlobal HealthHumansMaleMiddle AgedPapillomaviridaePapillomavirus InfectionsPhylogeographyPrevalenceRisk AssessmentAsiacervical cancerHPVoncogenic riskphylogeny

Identifiers

PMID24879800
PMCPMC4539913

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.