Evidence map›Paper›PMID 24879544›Full record

ArticleMarine drugs2014

Zn-driven discovery of a hydrothermal vent fungal metabolite clavatustide C, and an experimental study of the anti-cancer mechanism of clavatustide B.

Panpan Ye, Ling Shen, Wei Jiang, Ying Ye, Chen-Tung Arthur Chen, Xiaodan Wu, Kuiwu Wang, Bin Wu

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Grapevine exarcerbates the virulence ofFrontiers in plant science · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Cyclic Peptides for the Treatment of Cancers: A Review.Molecules (Basel, Switzerland) · 2022
    Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Panpan YeEye Center, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310000, China. yepanpan@hotmail.com.
Ling ShenEye Center, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310000, China. zzynwk@126.com.
Wei JiangOcean College, Zhejiang University, Hangzhou 310058, China. jw6912@163.com.
Ying YeOcean College, Zhejiang University, Hangzhou 310058, China. gsyeying@zju.edu.cn.
Chen-Tung Arthur ChenOcean College, Zhejiang University, Hangzhou 310058, China. ctchen@faculty.nsysu.edu.tw.
Xiaodan WuOcean College, Zhejiang University, Hangzhou 310058, China. wxd_zju@163.com.
Kuiwu WangDepartment of Applied Chemistry, Zhejiang Gongshang University, Hangzhou 310058, China. wkwnpc@zjgsu.edu.cn.
Bin WuOcean College, Zhejiang University, Hangzhou 310058, China. wubin@zju.edu.cn.
Zhejiang University · CNSecond Affiliated Hospital of Zhejiang University · CNZhejiang Gongshang University · CNZhejiang Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A naturally new cyclopeptide, clavatustide C, was produced as a stress metabolite in response to abiotic stress elicitation by one of the hydrothermal vent fluid components Zn in the cultured mycelia of Aspergillus clavatus C2WU, which were isolated from Xenograpsus testudinatus. X. testudinatus lives at extreme, toxic habitat around the sulphur-rich hydrothermal vents in Taiwan Kueishantao. The known compound clavatustide B was also isolated and purified. This is the first example of a new hydrothermal vent microbial secondary metabolite produced in response to abiotic Zn treatment. The structures were established by spectroscopic means. The regulation of G1-S transition in hepatocellular carcinoma cell lines by clavatustide B was observed in our previous study. The purpose of the present study was to verify these results in other types of cancer cell lines and elucidate the possible molecular mechanism for the anti-cancer activities of clavatustide B. In different human cancer cell lines, including pancreatic cancer (Panc-1), gastric cancer (MGC-803), colorectal cancer (SW-480), retinoblastoma (WERI-Rb-1) and prostate cancer (PC3), clavatustide B efficiently suppressed cell proliferations in a dose-dependent manner. Although different cancer cell lines presented variety in Max effect dose and IC50 dose, all cancer cell lines showed a lower Max effect dose and IC50 dose compared with human fibroblasts (hFB) (p < 0.05). Moreover, significant accumulations in G1 phases and a reduction in S phases (p < 0.05) were observed under clavatustide B treatment. The expression levels of 2622 genes including 39 cell cycle-associated genes in HepG2 cells were significantly altered by the treatment with 15 μg/mL clavatustide B after 48 h. CCNE2 (cyclin E2) was proved to be the key regulator of clavatustide B-induced G1-S transition blocking in several cancer cell lines by using real-time PCR.

Indexed as

AnimalsAntineoplastic AgentsAspergillusBrachyuraCell Line, TumorCell ProliferationCyclinsDepsipeptidesDose-Response Relationship, DrugFibroblastsG1 PhaseGene Expression RegulationHumansHydrothermal VentsInhibitory Concentration 50NeoplasmsAntineoplastic AgentsCCNE2 protein, humanclavatustide BCyclinsDepsipeptidesPeptides, CyclicZinc

Identifiers

PMID24879544
PMCPMC4071572
OpenAlexW2058337605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.