Evidence map›Paper›PMID 24879433›Full record

ArticlePlant physiology2014

The Emerging Role of Reactive Oxygen Species Signaling during Lateral Root Development.

Concepción Manzano, Mercedes Pallero-Baena, Ilda Casimiro, Bert De Rybel, Beata Orman-Ligeza, Gert Van Isterdael, Tom Beeckman, Xavier Draye, Pedro Casero, Juan C Del Pozo

Abstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

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  14. Intrinsic Mechanism of CaClInternational journal of molecular sciences · 2024
    Article
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  19. Review
  20. HPlant, cell & environment · 2023
    Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Concepción ManzanoCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Mercedes Pallero-BaenaCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Ilda CasimiroCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Bert De RybelCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Beata Orman-LigezaCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Gert Van IsterdaelCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Tom BeeckmanCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Xavier DrayeCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Pedro CaseroCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
Juan C Del PozoCentro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.) pozo@inia.es.ORCID http://orcid.org/0000-0002-4113-457X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Overall root architecture is the combined result of primary and lateral root growth and is influenced by both intrinsic genetic programs and external signals. One of the main questions for root biologists is how plants control the number of lateral root primordia and their emergence through the main root. We recently identified S-phase kinase-associated protein2 (SKP2B) as a new early marker for lateral root development. Here, we took advantage of its specific expression pattern in Arabidopsis (Arabidopsis thaliana) in a cell-sorting and transcriptomic approach to generate a lateral root-specific cell sorting SKP2B data set that represents the endogenous genetic developmental program. We first validated this data set by showing that many of the identified genes have a function during root growth or lateral root development. Importantly, genes encoding peroxidases were highly represented in our data set. Thus, we next focused on this class of enzymes and showed, using genetic and chemical inhibitor studies, that peroxidase activity and reactive oxygen species signaling are specifically required during lateral root emergence but, intriguingly, not for primordium specification itself.

Identifiers

PMID24879433
PMCPMC4081325

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