Evidence map›Paper›PMID 24879355›Full record

ArticleNature communications2014

Two nested developmental waves demarcate a compartment boundary in the mouse lung.

Denise Martinez Alanis, Daniel R Chang, Haruhiko Akiyama, Mark A Krasnow, Jichao Chen

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 1 pooled it
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 1 synthesis or guideline pooled it, 125 citations in OpenAlex.

  1. Pooled it
  2. Mapping Embryonic Mouse Lung Development Using Enhanced Spatial Transcriptomics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Denise Martinez Alanis1] Department of Pulmonary Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA [2].
Daniel R Chang1] Department of Pulmonary Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA [2].
Haruhiko AkiyamaDepartment of Orthopedics, Kyoto University, Sakyo, Kyoto 606-8507, Japan.
Mark A KrasnowDepartment of Biochemistry and HHMI, Stanford University School of Medicine, Stanford, California 94305-5307, USA.
Jichao Chen1] Department of Pulmonary Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA [2] Department of Biochemistry and HHMI, Stanford University School of Medicine, Stanford, California 94305-5307, USA [3] Department of Biochemistry and Molecular Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA [4] Center for Stem Cells and Developmental Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA.
Stanford University · USThe University of Texas MD Anderson Cancer Center · USKyoto University · JP

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Interrogation of individual cells to identify progenitors and their nichesU01HL099999 · NHLBI · STANFORD UNIVERSITY · PI WEISSMAN, IRVING L. · 2009 to 2015
$7.8M
Interrogation of individual cells to identify progenitor cells and their nichesU01HL099995 · NHLBI · STANFORD UNIVERSITY · PI KRASNOW, MARK A · 2009 to 2015
$7.0M
Howard Hughes Medical InstituteNCI NIH HHS CA 16672NCI NIH HHS P30 CA016672NHLBI NIH HHS U01 HL099995NHLBI NIH HHS U01 HL099999
6 · The paper itself

Abstract

The lung is a branched tubular network with two distinct compartments--the proximal conducting airways and the peripheral gas exchange region--separated by a discrete boundary termed the bronchoalveolar duct junction (BADJ). Here we image the developing mouse lung in three-dimensions (3D) and show that two nested developmental waves demarcate the BADJ under the control of a global hormonal signal. A first wave of branching morphogenesis progresses throughout embryonic development, generating branches for both compartments. A second wave of conducting airway differentiation follows the first wave but terminates earlier, specifying the proximal compartment and setting the BADJ. The second wave is terminated by a glucocorticoid signalling: premature activation or loss of glucocorticoid signalling causes a proximal or distal shift, respectively, in BADJ location. The results demonstrate a new mechanism of boundary formation in complex, 3D organs and provide new insights into glucocorticoid therapies for lung defects in premature birth.

Indexed as

ActinsAnimalsBronchiCadherinsCell DifferentiationGlucocorticoidsImaging, Three-DimensionalImmunohistochemistryIntercellular Signaling Peptides and ProteinsLungMiceMorphogenesisPeptidesPulmonary AlveoliPulmonary Surfactant-Associated Protein CReceptor for Advanced Glycation End ProductsActinsCadherinsGlucocorticoidsIntercellular Signaling Peptides and ProteinsPeptidesPulmonary Surfactant-Associated Protein CReceptor for Advanced Glycation End ProductsReceptors, ImmunologicScgb1a1 protein, mouseSftpc protein, mouseSox2 protein, mouseSOXB1 Transcription FactorsUteroglobin

Identifiers

PMID24879355
PMCPMC4115076
OpenAlexW2138181097

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.