Evidence map›Paper›PMID 24878002›Full record

ArticleMolecular and biochemical parasitology2014

A dual luciferase system for analysis of post-transcriptional regulation of gene expression in Leishmania.

Radika Soysa, Nicola S Carter, Phillip A Yates

Abstract readEvaluation Study
In one paragraph

Article in Molecular and biochemical parasitology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Reporter gene systems: A powerful tool forCurrent research in microbial sciences · 2022
    Article
  3. Purine-responsive expression of theThe Journal of biological chemistry · 2020
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Radika SoysaDepartment of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239, United States.
Nicola S CarterDepartment of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239, United States.
Phillip A YatesDepartment of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239, United States. Electronic address: yatesp@ohsu.edu.

Funding

Oregon Clinical and Translational Research InstituteUL1TR000128 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ELLISON, DAVID H · 2012 to 2015
$28.7M
Purine Nucleoside/Nucleobase Transporters in LeishmaniaR01AI044138 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI LANDFEAR, SCOTT M · 1999 to 2014
$4.6M
GENETIC ANALYSIS OF PURINE METABOLISM IN LEISHMANIA DONOR37AI023682 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI ULLMAN, BUDDY · 1998 to 2007
$2.7M
GENETICS OF PURINE METABOLISM IN LEISHMANIA DONOVANIR01AI023682 · NIAID · UNIVERSITY OF KENTUCKY · PI ULLMAN, BUDDY · 1985 to 2013
$2.0M
NCATS NIH HHS UL1 TR000128NCATS NIH HHS UL1TR000128NIAID NIH HHS AI023682NIAID NIH HHS AI044138NIAID NIH HHS R01 AI023682NIAID NIH HHS R01 AI044138NIAID NIH HHS R37 AI023682
6 · The paper itself

Abstract

Gene expression in kinetoplastid parasites is regulated via post-transcriptional mechanisms that modulate mRNA turnover, translation rate, and/or post-translational protein stability. To facilitate the analysis of post-transcriptional regulation, a dual luciferase system was developed in which firefly and Renilla luciferase reporters genetically fused to compatible drug resistance genes are integrated in place of one allele of the gene of interest and of an internal control gene, respectively, in a manner that preserves the cognate pre-mRNA processing signals. The sensitivity and reproducibility of the assay coupled with the ability to rapidly assemble reporter integration constructs render the dual luciferase system suitable for analysis of multiple candidates derived from global expression analysis platforms. To demonstrate the utility of the system, regulation of three genes in response to purine starvation was examined in Leishmania donovani promastigotes. This dual luciferase system should be directly applicable to the analysis of post-transcriptional regulation in other kinetoplastids.

Indexed as

Gene Expression RegulationGene Expression ProfilingGenes, ReporterLeishmaniaLuciferases, FireflyLuciferases, RenillaTranscription, GeneticTransfectionLuciferases, FireflyLuciferases, RenillaFirefly luciferaseGene regulationLeishmaniaNutrient stress responseRenilla luciferaseTranslational regulation

Identifiers

PMID24878002
PMCPMC4142068

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.