Evidence map›Paper›PMID 24877086›Full record

ArticleBioMed research international2014

The structural modeling of the interaction between levofloxacin and the Mycobacterium tuberculosis gyrase catalytic site sheds light on the mechanisms of fluoroquinolones resistant tuberculosis in Colombian clinical isolates.

N Alvarez, E Zapata, G I Mejía, T Realpe, P Araque, C Peláez, F Rouzaud, J Robledo

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Molecular Targets Related Drug Resistance Mechanisms in MDR-, XDR-, and TDR-Frontiers in cellular and infection microbiology · 2018
    Review
  3. Article
  4. Some Synonymous and NonsynonymousAntimicrobial agents and chemotherapy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

N AlvarezCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia ; Universidad Pontificia Bolivariana-(UPB), Calle 78b No. 72a-109, Medellín, Colombia.
E ZapataCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia.
G I MejíaCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia ; Universidad Pontificia Bolivariana-(UPB), Calle 78b No. 72a-109, Medellín, Colombia.
T RealpeCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia ; Universidad Pontificia Bolivariana-(UPB), Calle 78b No. 72a-109, Medellín, Colombia.
P AraqueEscuela de Ingeniería de Antioquia, Km 2 + 200 Vía al Aeropuerto José María Córdova, Envigado, Colombia.
C PeláezGrupo Interdisciplinario de Estudios Moleculares-(GIEM), Universidad de Antioquia, Calle 67 No. 108-53, Medellín, Colombia.
F RouzaudCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia ; Equal Opportunity Life Sciences, 1132 Parrish Drive, Rockville, MD 20851, USA.
J RobledoCorporación Para Investigaciones Biológicas-(CIB), Bacteriology and Mycobacteria Unit, Carrera 72a N 78B-141, Medellín, Colombia ; Universidad Pontificia Bolivariana-(UPB), Calle 78b No. 72a-109, Medellín, Colombia.
Corporación para Investigaciones Biológicas · COEIA University · COUniversidad de Antioquia · COUniversidad Pontificia Bolivariana · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We compared the prevalence of levofloxacin (LVX) resistance with that of ofloxacin (OFX) and moxifloxacin (MFX) among multidrug resistant (MDR) MTB clinical isolates collected in Medellin, Colombia, between 2004 and 2009 and aimed at unraveling the underlying molecular mechanisms that explain the correlation between QRDR-A mutations and LVX resistance phenotype. We tested 104 MDR isolates for their susceptibility to OFX, MFX, and LVX. Resistance to OFX was encountered in 10 (9.6%) of the isolates among which 8 (7.7%) were also resistant to LVX and 6 (5.7%) to MFX. Four isolates resistant to the 3 FQ were harboring the Asp94Gly substitution, whilst 2 other isolates resistant to OFX and LVX presented the Ala90Val mutation. No mutations were found in the QRDR-B region. The molecular modeling of the interaction between LVX and the DNA-DNA gyrase complex indicates that the loss of an acetyl group in the Asp94Gly mutation removes the acid base interaction with LVX necessary for the quinolone activity. The Ala90Val mutation that substitutes a methyl for an isopropyl group induces a steric modification that blocks the LVX access to the gyrase catalytic site.

Indexed as

Bacterial ProteinsDNA GyraseMolecular Docking SimulationMutation, MissenseAmino Acid SubstitutionAnti-Bacterial AgentsCatalytic DomainColombiaCrystallography, X-RayDrug Resistance, Multiple, BacterialFemaleHumansLevofloxacinMaleMycobacterium tuberculosisTuberculosis, Multidrug-ResistantAnti-Bacterial AgentsBacterial ProteinsDNA GyraseLevofloxacin

Identifiers

PMID24877086
PMCPMC4022255
OpenAlexW2100099505

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.