Evidence map›Paper›PMID 24872579›Full record

ArticleJournal of virology2014

Particle conformation regulates antibody access to a conserved GII.4 norovirus blockade epitope.

Lisa C Lindesmith, Eric F Donaldson, Martina Beltramello, Stefania Pintus, Davide Corti, Jesica Swanstrom, Kari Debbink, Taylor A Jones, Antonio Lanzavecchia, Ralph S Baric

Abstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  16. Virus-Host Interactions Between Nonsecretors and Human Norovirus.Cellular and molecular gastroenterology and hepatology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lisa C LindesmithDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Eric F DonaldsonDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Martina BeltramelloInstitute for Research in Biomedicine, Bellinzona, Switzerland.
Stefania PintusInstitute for Research in Biomedicine, Bellinzona, Switzerland.
Davide CortiInstitute for Research in Biomedicine, Bellinzona, Switzerland Humabs BioMed SA, Bellinzona, Switzerland.
Jesica SwanstromDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Kari DebbinkDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Taylor A JonesDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Antonio LanzavecchiaInstitute for Research in Biomedicine, Bellinzona, Switzerland Institute of Microbiology, ETH Zurich, Zurich, Switzerland.
Ralph S BaricDepartment of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA rbaric@email.unc.edu.

Funding

Susceptibility and Protective Immunity to NorovirusesR01AI056351 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S · 2003 to 2013
$4.2M
NIAID NIH HHS AI056351NIAID NIH HHS R01 AI056351
6 · The paper itself

Abstract

unlabelledGII.4 noroviruses (NoVs) are the primary cause of epidemic viral acute gastroenteritis. One primary obstacle to successful NoV vaccination is the extensive degree of antigenic diversity among strains. The major capsid protein of GII.4 strains is evolving rapidly, resulting in the emergence of new strains with altered blockade epitopes. In addition to characterizing these evolving blockade epitopes, we have identified monoclonal antibodies (MAbs) that recognize a blockade epitope conserved across time-ordered GII.4 strains. Uniquely, the blockade potencies of MAbs that recognize the conserved GII.4 blockade epitope were temperature sensitive, suggesting that particle conformation may regulate functional access to conserved blockade non-surface-exposed epitopes. To map conformation-regulating motifs, we used bioinformatics tools to predict conserved motifs within the protruding domain of the capsid and designed mutant VLPs to test the impacts of substitutions in these motifs on antibody cross-GII.4 blockade. Charge substitutions at residues 310, 316, 484, and 493 impacted the blockade potential of cross-GII.4 blockade MAbs with minimal impact on the blockade of MAbs targeting other, separately evolving blockade epitopes. Specifically, residue 310 modulated antibody blockade temperature sensitivity in the tested strains. These data suggest access to the conserved GII.4 blockade antibody epitope is regulated by particle conformation, temperature, and amino acid residues positioned outside the antibody binding site. The regulating motif is under limited selective pressure by the host immune response and may provide a robust target for broadly reactive NoV therapeutics and protective vaccines. IMPORTANCE: In this study, we explored the factors that govern norovirus (NoV) cross-strain antibody blockade. We found that access to the conserved GII.4 blockade epitope is regulated by temperature and distal residues outside the antibody binding site. These data are most consistent with a model of NoV particle conformation plasticity that regulates antibody binding to a distally conserved blockade epitope. Further, antibody "locking" of the particle into an epitope-accessible conformation prevents ligand binding, providing a potential target for broadly effective drugs. These observations open lines of inquiry into the mechanisms of human NoV entry and uncoating, fundamental biological questions that are currently unanswerable for these noncultivatable pathogens.

Indexed as

Antibodies, MonoclonalAntibodies, ViralBinding SitesCaliciviridae InfectionsCapsidCapsid ProteinsEpitopesGastroenteritisNorovirusVirionAntibodies, MonoclonalAntibodies, ViralCapsid ProteinsEpitopes

Identifiers

PMID24872579
PMCPMC4136251

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.