Evidence map›Paper›PMID 24872416›Full record

ArticleThe Journal of biological chemistry2014

Interferon regulatory factor 6 differentially regulates Toll-like receptor 2-dependent chemokine gene expression in epithelial cells.

Mei Qi Kwa, Thao Nguyen, Jennifer Huynh, Divya Ramnath, Dominic De Nardo, Pui Yeng Lam, Eric C Reynolds, John A Hamilton, Matthew J Sweet, Glen M Scholz

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Interferon regulatory factor 6 is required for proper wound healing in vivo.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Article
  16. A cleft lip and palate gene, Irf6, is involved in osteoblast differentiation of craniofacial bone.Developmental dynamics : an official publication of the American Association of Anatomists · 2019
    Article
  17. Article
  18. Integrative Analysis IdentifiedFrontiers in neurology · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Mei Qi KwaFrom the Oral Health Cooperative Research Centre, Melbourne Dental School, and Bio21 Institute, and Department of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Thao NguyenDepartment of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Jennifer HuynhFrom the Oral Health Cooperative Research Centre, Melbourne Dental School, and Bio21 Institute, and Department of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Divya Ramnaththe Institute for Molecular Bioscience, and Australian Infectious Disease Research Centre, The University of Queensland, Queensland 4072, Australia.
Dominic De NardoDepartment of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Pui Yeng LamDepartment of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Eric C ReynoldsFrom the Oral Health Cooperative Research Centre, Melbourne Dental School, and Bio21 Institute, and.
John A HamiltonDepartment of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and.
Matthew J Sweetthe Institute for Molecular Bioscience, and Australian Infectious Disease Research Centre, The University of Queensland, Queensland 4072, Australia.
Glen M ScholzFrom the Oral Health Cooperative Research Centre, Melbourne Dental School, and Bio21 Institute, and Department of Medicine, Royal Melbourne Hospital, The University of Melbourne, Victoria 3010, Australia, and glenms@unimelb.edu.au.
University of Melbourne · AUUniversity of Queensland · AUThe Royal Melbourne Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epidermal and mucosal epithelial cells are integral to host defense. They not only act as a physical barrier but also utilize pattern recognition receptors, such as the Toll-like receptors (TLRs), to detect and respond to pathogens. Members of the interferon regulatory factor (IRF) family of transcription factors are key components of TLR signaling as they impart specificity to downstream responses. Although IRF6 is a critical regulator of epithelial cell proliferation and differentiation, its role in TLR signaling has not previously been addressed. We show here that IRF6 is activated by IRAK1 as well as by MyD88 but not by TRIF or TBK1. Co-immunoprecipitation experiments further demonstrated that IRF6 can interact with IRAK1. Gene silencing in epithelial cells along with gene promoter reporter assays showed that IRAK1 mediates TLR2-inducible CCL5 gene expression at least in part by promoting IRF6 activation. Conversely, IRAK1 regulated CXCL8 gene expression independently of IRF6, thus identifying a molecular mechanism by which TLR2 signaling differentially regulates the expression of specific chemokines in epithelial cells. Bioinformatics analysis and mutagenesis-based experiments identified Ser-413 and Ser-424 as key regulatory sites in IRF6. Phosphomimetic mutation of these residues resulted in greatly enhanced IRF6 dimerization and trans-activator function. Collectively, our findings suggest that, in addition to its importance for epithelial barrier function, IRF6 also contributes to host defense by providing specificity to the regulation of inflammatory chemokine expression by TLR2 in epithelial cells.

Indexed as

Adaptor Proteins, Vesicular TransportAmino Acid SubstitutionCell LineChemokine CCL5Epithelial CellsGene Expression RegulationHumansInterferon Regulatory FactorsInterleukin-1 Receptor-Associated KinasesInterleukin-8Mutation, MissenseMyeloid Differentiation Factor 88Protein Serine-Threonine KinasesSignal TransductionToll-Like Receptor 2Adaptor Proteins, Vesicular TransportCCL5 protein, humanChemokine CCL5CXCL8 protein, humanInterferon Regulatory FactorsInterleukin-1 Receptor-Associated KinasesInterleukin-8IRAK1 protein, humanIRF6 protein, humanMYD88 protein, humanMyeloid Differentiation Factor 88Protein Serine-Threonine KinasesTBK1 protein, humanTICAM1 protein, humanTLR2 protein, humanToll-Like Receptor 2ChemokineEpithelial CellInflammationInterferon Regulatory Factor (IRF)Interleukin Receptor-associated KinaseToll-like Receptor (TLR)Transcription Factor

Identifiers

PMID24872416
PMCPMC4094085
OpenAlexW1976914598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.