Evidence map›Paper›PMID 24872414›Full record

ArticleThe Journal of biological chemistry2014

Phosphorylation of the transcription activator CLOCK regulates progression through a ∼ 24-h feedback loop to influence the circadian period in Drosophila.

Guruswamy Mahesh, EunHee Jeong, Fanny S Ng, Yixiao Liu, Kushan Gunawardhana, Jerry H Houl, Evrim Yildirim, Ravi Amunugama, Richard Jones, David L Allen and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Alternative splicing ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Alternative splicing ofbioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Inhibition of Expression of the Circadian Clock GeneInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Molecular mechanism of the repressive phase of the mammalian circadian clock.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Article
  13. CLOCK stabilizes CYCLE to initiate clock function inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Guruswamy MaheshFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843.
EunHee Jeongthe Department of Brain Science, Ajou University School of Medicine, Suwon 443-380, Korea.
Fanny S NgFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843.
Yixiao LiuFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843.
Kushan GunawardhanaFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843.
Jerry H HoulFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843.
Evrim Yildirimthe Department of Molecular Biology and Biochemistry, Rutgers University, Center for Advanced Biotechnology and Medicine, Piscataway New Jersey 08854.
Ravi AmunugamaMS Bioworks, LLC, Ann Arbor, Michigan 48108, and.
Richard JonesMS Bioworks, LLC, Ann Arbor, Michigan 48108, and.
David L AllenMS Bioworks, LLC, Ann Arbor, Michigan 48108, and.
Isaac Ederythe Department of Molecular Biology and Biochemistry, Rutgers University, Center for Advanced Biotechnology and Medicine, Piscataway New Jersey 08854.
Eun Young Kimthe Department of Brain Science, Ajou University School of Medicine, Suwon 443-380, Korea.
Paul E HardinFrom the Department of Biology and Center for Biological Clocks Research, Texas A&M University, College Station, Texas 77843, phardin@bio.tamu.edu.
Texas A&M University · USRutgers, The State University of New Jersey · US

Funding

CLOCK MECHANISM UNDERLYING RHYTHMIC BEHAVIORR01NS034958 · NINDS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI EDERY, ISAAC · 1995 to 2016
$5.5M
Regulation of Circadian TranscriptionR01NS052854 · NINDS · TEXAS A&M UNIVERSITY · PI HARDIN, PAUL E · 2006 to 2014
$2.7M
NINDS NIH HHS NS034958NINDS NIH HHS NS052854NINDS NIH HHS R01 NS034958NINDS NIH HHS R01 NS052854
6 · The paper itself

Abstract

Circadian (≅ 24 h) clocks control daily rhythms in metabolism, physiology, and behavior in animals, plants, and microbes. In Drosophila, these clocks keep circadian time via transcriptional feedback loops in which clock-cycle (CLK-CYC) initiates transcription of period (per) and timeless (tim), accumulating levels of PER and TIM proteins feed back to inhibit CLK-CYC, and degradation of PER and TIM allows CLK-CYC to initiate the next cycle of transcription. The timing of key events in this feedback loop are controlled by, or coincide with, rhythms in PER and CLK phosphorylation, where PER and CLK phosphorylation is high during transcriptional repression. PER phosphorylation at specific sites controls its subcellular localization, activity, and stability, but comparatively little is known about the identity and function of CLK phosphorylation sites. Here we identify eight CLK phosphorylation sites via mass spectrometry and determine how phosphorylation at these sites impacts behavioral and molecular rhythms by transgenic rescue of a new Clk null mutant. Eliminating phosphorylation at four of these sites accelerates the feedback loop to shorten the circadian period, whereas loss of CLK phosphorylation at serine 859 increases CLK activity, thereby increasing PER levels and accelerating transcriptional repression. These results demonstrate that CLK phosphorylation influences the circadian period by regulating CLK activity and progression through the feedback loop.

Indexed as

AnimalsARNTL Transcription FactorsCircadian RhythmCLOCK ProteinsDrosophila melanogasterDrosophila ProteinsPeriod Circadian ProteinsPhosphorylationARNTL Transcription FactorsClk protein, DrosophilaCLOCK Proteinscyc protein, DrosophilaDrosophila ProteinsPeriod Circadian ProteinsPER protein, Drosophilatim protein, DrosophilaBehavioral RhythmsCircadian ClockCLOCK ProteinDrosophila GeneticsFeedback LoopMass Spectrometry (MS)Protein PhosphorylationTranscription Regulation

Identifiers

PMID24872414
PMCPMC4094078
OpenAlexW2052426890

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.