Evidence map›Paper›PMID 24872413›Full record

ArticleThe Journal of biological chemistry2014

High mobility group nucleosomal binding domain 2 (HMGN2) SUMOylation by the SUMO E3 ligase PIAS1 decreases the binding affinity to nucleosome core particles.

Jie Wu, Sol Kim, Man Sup Kwak, Jang Bin Jeong, Hyun Jin Min, Ho-Geun Yoon, Jin-Hyun Ahn, Jeon-Soo Shin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. High Mobility Group Proteins in Sepsis.Frontiers in immunology · 2022
    Review
  3. Article
  4. Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Jie WuFrom the Department of Microbiology, Brain Korea 21 Plus Project for Medical Science, the Laboratory of Medical Genetics, Harbin Medical University, Harbin 150086, China, and.
Sol KimFrom the Department of Microbiology.
Man Sup KwakFrom the Department of Microbiology.
Jang Bin JeongFrom the Department of Microbiology, Brain Korea 21 Plus Project for Medical Science.
Hyun Jin MinFrom the Department of Microbiology, Brain Korea 21 Plus Project for Medical Science.
Ho-Geun YoonBrain Korea 21 Plus Project for Medical Science, Department of Biochemistry and Molecular Biology, Yonsei University College of Medicine, Seoul 120-752, Korea.
Jin-Hyun Ahnthe Department of Molecular Cell Biology, Sungkyunkwan University School of Medicine, Suwon 440-746, Korea.
Jeon-Soo ShinFrom the Department of Microbiology, Brain Korea 21 Plus Project for Medical Science, Severance Biomedical Science Institute and Institute for Immunology and Immunological Diseases, and jsshin6203@yuhs.ac.
Yonsei University · KRCzech Academy of Sciences, Institute of Microbiology · CZHarbin Medical University · CNSungkyunkwan University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High mobility group nucleosomal binding domain 2 (HMGN2) is a small and unique non-histone protein that has many functions in a variety of cellular processes, including regulation of chromatin structure, transcription, and DNA repair. In addition, it may have other roles in antimicrobial activity, cell homing, and regulating cytokine release. Although the biochemical properties of HMGN2 protein are regulated by acetylation and phosphorylation, it is not yet known whether HMGN2 activity can also be regulated by SUMOylation. In this study, we demonstrated for the first time that HMGN2 is modified by covalent attachment of small ubiquitin-related modifier 1 (SUMO1) by pro-inflammatory signal and identified the major SUMOylated lysine residues that localize to the HMGN2 nucleosome-binding domain at Lys-17 and Lys-35. SENP1 can deSUMOylate SUMOylated HMGN2, and PIAS1 is the E3 ligase responsible for SUMOylation of HMGN2. Finally, using SUMO1-conjugated HMGN2 purified from a basal SUMOylation system in Escherichia coli, we demonstrated that SUMOylated HMGN2 has decreased the binding affinity to nucleosome core particles in comparison to unSUMOylated HMGN2. These observations potentially provide new perspectives for understanding the functions of HMGN2 in inflammatory reaction.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionBinding SitesCell LineCysteine EndopeptidasesEndopeptidasesEscherichia coliHEK293 CellsHeLa CellsHMGN2 ProteinHumansLysineMolecular Sequence DataNucleosomesProtein BindingProtein Inhibitors of Activated STATCysteine EndopeptidasesEndopeptidasesHMGN2 ProteinLysineNucleosomesPIAS1 protein, humanProtein Inhibitors of Activated STATRecombinant ProteinsSENP1 protein, humanSmall Ubiquitin-Related Modifier ProteinsSUMO-1 ProteinSUMO1 protein, humanUbiquitin-Protein LigasesChromatin RegulationHMGN2InflammationMolecular Cell BiologyNucleosomeSumoylation

Identifiers

PMID24872413
PMCPMC4106318
OpenAlexW2091767719

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.