Evidence map›Paper›PMID 24871385›Full record

ArticleBiochemistry2014

Influence of domain stability on the properties of human apolipoprotein E3 and E4 and mouse apolipoprotein E.

David Nguyen, Padmaja Dhanasekaran, Margaret Nickel, Chiharu Mizuguchi, Mayu Watanabe, Hiroyuki Saito, Michael C Phillips, Sissel Lund-Katz

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Inhibition of ACAT as a Therapeutic Target for Alzheimer's Disease Is Independent of ApoE4 Lipidation.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2023
    Article
  7. Article
  8. Sex-dependent effect ofDisease models & mechanisms · 2020
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. A mechanism for lipid binding to apoE and the role of intrinsically disordered regions coupled to domain-domain interactions.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Helical structure, stability, and dynamics in human apolipoprotein E3 and E4 by hydrogen exchange and mass spectrometry.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Article
  16. APOE genotype and stress response - a mini review.Lipids in health and disease · 2016
    Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

David Nguyen
Padmaja Dhanasekaran
Margaret Nickel
Chiharu Mizuguchi
Mayu Watanabe
Hiroyuki Saito
Michael C Phillips
Sissel Lund-Katz
Tokushima University · JPUniversity of Pennsylvania · USChildren's Hospital of Philadelphia · USPhiladelphia University · US

Funding

STRUCTURAL BASIS OF THE INTERACTIONS OF APOLIPOPROTEIN ER01HL056083 · NHLBI · MCP HAHNEMANN UNIVERSITY · PI LUND-KATZ, SISSEL · 1997 to 2013
$5.0M
NHLBI NIH HHS HL56083
6 · The paper itself

Abstract

The human apolipoprotein (apo) E4 isoform, which differs from wild-type apoE3 by the single amino acid substitution C112R, is associated with elevated risk of cardiovascular and Alzheimer’s diseases, but the molecular basis for this variation between isoforms is not understood. Human apoE is a two-domain protein comprising an N-terminal helix bundle and a separately folded C-terminal region. Here, we examine the concept that the ability of the protein to bind to lipid surfaces is influenced by the stability (or readiness to unfold) of these domains. The lipid-free structures and abilities to bind to lipid and lipoprotein particles of a series of human and mouse apoE variants with varying domain stabilities and domain–domain interactions are compared. As assessed by urea denaturation, the two domains are more unstable in apoE4 than in apoE3. To distinguish the contributions of the destabilization of each domain to the greater lipid-binding ability of apoE4, the properties of the apoE4 R61T and E255A variants, which have the same helix bundle stabilities but altered C-terminal domain stabilities, are compared. In these cases, the effects on lipid-binding properties are relatively minor, indicating that the destabilization of the helix bundle domain is primarily responsible for the enhanced lipid-binding ability of apoE4. Unlike human apoE, mouse apoE behaves essentially as a single domain, and its lipid-binding characteristics are more similar to those of apoE4. Together, the results show that the overall stability of the entire apoE molecule exerts a major influence on its lipid- and lipoprotein-binding properties.

Indexed as

AnimalsApolipoprotein E3Apolipoprotein E4Apolipoproteins EDimyristoylphosphatidylcholineHumansLipidsLipoproteins, VLDLMiceProtein BindingProtein IsoformsProtein StabilityProtein Structure, TertiaryTrioleinApolipoprotein E3Apolipoprotein E4Apolipoproteins EDimyristoylphosphatidylcholineLipidsLipoproteins, VLDLProtein IsoformsTriolein

Identifiers

PMID24871385
PMCPMC4071092
OpenAlexW2029424321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.