Evidence map›Paper›PMID 24867389›Full record

ArticleOncotarget2014

Multigene mutational profiling of cholangiocarcinomas identifies actionable molecular subgroups.

Michele Simbolo, Matteo Fassan, Andrea Ruzzenente, Andrea Mafficini, Laura D Wood, Vincenzo Corbo, Davide Melisi, Giuseppe Malleo, Caterina Vicentini, Giorgio Malpeli and 12 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
18.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 208 citations in OpenAlex.

  1. Trial
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  5. Harmonization trial ofPathologica · 2025
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  15. JCO precision oncology · 2024
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57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 2 countries.

Michele SimboloARC-Net Research Centre, University and Hospital Trust of Verona, Verona, Italy.
Matteo Fassan
Andrea Ruzzenente
Andrea Mafficini
Laura D Wood
Vincenzo Corbo
Davide Melisi
Giuseppe Malleo
Caterina Vicentini
Giorgio Malpeli
Davide Antonello
Nicola Sperandio
Paola Capelli
Anna Tomezzoli
Calogero Iacono
Rita T Lawlor
Claudio Bassi
Ralph H Hruban
Alfredo Guglielmi
Giampaolo Tortora
Filippo de Braud
Aldo Scarpa
University of Verona · ITFondazione IRCCS Istituto Nazionale dei Tumori · ITJohns Hopkins University · USSidney Kimmel Comprehensive Cancer Center · US

Funding

Tumor Antigens for Individual Signatures and TherapyP50CA062924 · NCI · JOHNS HOPKINS UNIVERSITY · PI LENNON, ANNE MARIE · 1993 to 2022
$54.6M
NCI NIH HHS CA62924NCI NIH HHS P50 CA062924
6 · The paper itself

Abstract

One-hundred-fifty-three biliary cancers, including 70 intrahepatic cholangiocarcinomas (ICC), 57 extrahepatic cholangiocarcinomas (ECC) and 26 gallbladder carcinomas (GBC) were assessed for mutations in 56 genes using multigene next-generation sequencing. Expression of EGFR and mTOR pathway genes was investigated by immunohistochemistry. At least one mutated gene was observed in 118/153 (77%) cancers. The genes most frequently involved were KRAS (28%), TP53 (18%), ARID1A (12%), IDH1/2 (9%), PBRM1 (9%), BAP1 (7%), and PIK3CA (7%). IDH1/2 (p=0.0005) and BAP1 (p=0.0097) mutations were characteristic of ICC, while KRAS (p=0.0019) and TP53 (p=0.0019) were more frequent in ECC and GBC. Multivariate analysis identified tumour stage and TP53 mutations as independent predictors of survival. Alterations in chromatin remodeling genes (ARID1A, BAP1, PBRM1, SMARCB1) were seen in 31% of cases. Potentially actionable mutations were seen in 104/153 (68%) cancers: i) KRAS/NRAS/BRAF mutations were found in 34% of cancers; ii) mTOR pathway activation was documented by immunohistochemistry in 51% of cases and by mutations in mTOR pathway genes in 19% of cancers; iii) TGF-ß/Smad signaling was altered in 10.5% cancers; iv) mutations in tyrosine kinase receptors were found in 9% cases. Our study identified molecular subgroups of cholangiocarcinomas that can be explored for specific drug targeting in clinical trials.

Indexed as

AgedBile Duct NeoplasmsBile Ducts, ExtrahepaticBile Ducts, IntrahepaticBiomarkers, TumorCholangiocarcinomaFemaleFollow-Up StudiesGallbladder NeoplasmsHigh-Throughput Nucleotide SequencingHumansImmunoenzyme TechniquesIn Situ Hybridization, FluorescenceMaleMiddle AgedMutationBiomarkers, Tumor

Identifiers

PMID24867389
PMCPMC4058049
OpenAlexW1806572515

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.