Evidence map›Paper›PMID 24865442›Full record

ArticleInternational journal of oncology2014

Differential expression of miRNAs in colon cancer between African and Caucasian Americans: implications for cancer racial health disparities.

Ellen Li, Ping Ji, Nengtai Ouyang, Yuanhao Zhang, Xin Yu Wang, Deborah C Rubin, Nicholas O Davidson, Roberto Bergamaschi, Kenneth R Shroyer, Stephanie Burke and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of oncology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Cancer secretome: finding out hidden messages in extracellular secretions.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Differential expression of microRNA between triple negative breast cancer patients of African American and European American descent.Biotechnic & histochemistry : official publication of the Biological Stain Commission · 2022
    Article
  12. Review
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  14. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Ellen LiDivision of Gastroenterology, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Ping JiDivision of Cancer Prevention, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Nengtai OuyangDivision of Cancer Prevention, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Yuanhao ZhangDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Xin Yu WangDivision of Cancer Prevention, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Deborah C RubinDivision of Gastroenterology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Nicholas O DavidsonDivision of Gastroenterology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Roberto BergamaschiDivision of Colon and Rectal Surgery, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Kenneth R ShroyerDepartment of Pathology, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Stephanie BurkeDepartment of Pathology, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Wei ZhuDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Jennie L WilliamsDivision of Cancer Prevention, Stony Brook University, Stony Brook, NY 11794-8160, USA.
Stony Brook University · USWashington University in St. Louis · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Phosphosulindac, miRNAs and cancer racial disparityR01CA140487 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI WILLIAMS, JENNIE L · 2010 to 2014
$1.6M
NCI NIH HHS P30 CA091842NCI NIH HHS P30 CA91842NCI NIH HHS R01 CA140487NCI NIH HHS R01CA140487NIDDK NIH HHS DK52574NIDDK NIH HHS P30 DK052574
6 · The paper itself

Abstract

Colorectal cancer (CRC) incidence and mortality are higher in African Americans (AAs) than in Caucasian Americans (CAs) and microRNAs (miRNAs) have been found to be dysregulated in colonic and other neoplasias. The aim of this exploratory study was to identify candidate miRNAs that could contribute to potential biological differences between AA and CA colon cancers. Total RNA was isolated from tumor and paired adjacent normal colon tissue from 30 AA and 31 CA colon cancer patients archived at Stony Brook University (SBU) and Washington University (WU)‑St. Louis Medical Center. miRNA profiles were determined by probing human genome-wide miRNA arrays with RNA isolated from each sample. Using repeated measures analysis of variance (RANOVA), miRNAs were selected that exhibited significant (p<0.05) interactions between race and tumor or significant (fold change >1.5, p<0.05) main effects of race and/or tumor. Quantitative polymerase chain reaction (q-PCR) was used to confirm miRNAs identified by microarray analysis. Candidate miRNA targets were analyzed using immunohistochemistry. RANOVA results indicated that miR-182, miR152, miR-204, miR-222 and miR-202 exhibited significant race and tumor main effects. Of these miRNAs, q-PCR analysis confirmed that miR-182 was upregulated in AA vs. CA tumors and exhibited significant race:tumor interaction. Immunohistochemical analysis revealed that the levels of FOXO1 and FOXO3A, two potential miR-182 targets, are reduced in AA tumors. miRNAs may play a role in the differences between AA and CA colon cancer. Specifically, differences in miRNA expression levels of miR-182 may contribute to decreased survival in AA colon cancer patients.

Indexed as

AdultAgedBlack or African AmericanColonic NeoplasmsFemaleHumansImmunohistochemistryMaleMicroRNAsMiddle AgedOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionWhite PeopleMicroRNAsMirn182 microRNA, human

Identifiers

PMID24865442
PMCPMC4091964
OpenAlexW2056587752

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.