Evidence map›Paper›PMID 24865424›Full record

ArticleThe Journal of clinical investigation2014

Lineage-specific splicing of a brain-enriched alternative exon promotes glioblastoma progression.

Roberto Ferrarese, Griffith R Harsh, Ajay K Yadav, Eva Bug, Daniel Maticzka, Wilfried Reichardt, Stephen M Dombrowski, Tyler E Miller, Anie P Masilamani, Fangping Dai and 21 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
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  10. Article
  11. The role of annexins in central nervous system development and disease.Journal of molecular medicine (Berlin, Germany) · 2024
    Review
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  17. Article
  18. NCell death and differentiation · 2023
    Article
  19. Review
  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 9 institutions in 4 countries.

Roberto Ferrarese
Griffith R Harsh
Ajay K Yadav
Eva Bug
Daniel Maticzka
Wilfried Reichardt
Stephen M Dombrowski
Tyler E Miller
Anie P Masilamani
Fangping Dai
Hyunsoo Kim
Michael Hadler
Denise M Scholtens
Irene L Y Yu
Jürgen Beck
Vinodh Srinivasasainagendra
Fabrizio Costa
Nicoleta Baxan
Dietmar Pfeifer
Dominik von Elverfeldt
Rolf Backofen
Astrid Weyerbrock
Christine W Duarte
Xiaolin He
Marco Prinz
James P Chandler
Hannes Vogel
Arnab Chakravarti
Jeremy N Rich
Maria S Carro
Markus Bredel
University of Freiburg · DENorthwestern University · USCleveland Clinic · USStanford University · USUniversity of Alabama at Birmingham · USMaine Medical Center · USNeurological Surgery · USThe Ohio State University Comprehensive Cancer Center – Arthur G. James Cancer Hospital and Richard J. Solove Research Institute · USUniversity of Delhi · IN

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
CONTEMPORARY THERAPEUTICS FOR ANAPLASTIC GLIOMASP20CA151129 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GILLESPIE, G. YANCEY · 2011 to 2013
$2.3M
NCI NIH HHS P20 CA151129NCI NIH HHS P20 CA151129-01A1NCI NIH HHS P30 CA016058NCI NIH HHS P30 CA060553NIGMS NIH HHS T32 GM007250
6 · The paper itself

Abstract

Tissue-specific alternative splicing is critical for the emergence of tissue identity during development, yet the role of this process in malignant transformation is undefined. Tissue-specific splicing involves evolutionarily conserved, alternative exons that represent only a minority of the total alternative exons identified. Many of these conserved exons have functional features that influence signaling pathways to profound biological effect. Here, we determined that lineage-specific splicing of a brain-enriched cassette exon in the membrane-binding tumor suppressor annexin A7 (ANXA7) diminishes endosomal targeting of the EGFR oncoprotein, consequently enhancing EGFR signaling during brain tumor progression. ANXA7 exon splicing was mediated by the ribonucleoprotein PTBP1, which is normally repressed during neuronal development. PTBP1 was highly expressed in glioblastomas due to loss of a brain-enriched microRNA (miR-124) and to PTBP1 amplification. The alternative ANXA7 splicing trait was present in precursor cells, suggesting that glioblastoma cells inherit the trait from a potential tumor-initiating ancestor and that these cells exploit this trait through accumulation of mutations that enhance EGFR signaling. Our data illustrate that lineage-specific splicing of a tissue-regulated alternative exon in a constituent of an oncogenic pathway eliminates tumor suppressor functions and promotes glioblastoma progression. This paradigm may offer a general model as to how tissue-specific regulatory mechanisms can reprogram normal developmental processes into oncogenic ones.

Indexed as

Alternative SplicingAnnexin A7Brain NeoplasmsCell LineageCell Transformation, NeoplasticDisease ProgressionErbB ReceptorsExonsGene Knockdown TechniquesGlioblastomaHeterogeneous-Nuclear RibonucleoproteinsHumansMicroRNAsNeoplastic Stem CellsNeovascularization, PathologicPolypyrimidine Tract-Binding ProteinAnnexin A7EGFR protein, humanErbB ReceptorsHeterogeneous-Nuclear RibonucleoproteinsMicroRNAsMIRN124 microRNA, humanPolypyrimidine Tract-Binding ProteinPTBP1 protein, humanRNA, MessengerRNA, Neoplasm

Identifiers

PMID24865424
PMCPMC4071411
OpenAlexW2094887188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.