Evidence map›Paper›PMID 24862560›Full record

ArticleHuman brain mapping2014

Serotonin transporter gene methylation is associated with hippocampal gray matter volume.

Udo Dannlowski, Harald Kugel, Ronny Redlich, Adriane Halik, Ilona Schneider, Nils Opel, Dominik Grotegerd, Kathrin Schwarte, Christiane Schettler, Oliver Ambrée and 8 more

Open access · greenAbstract read
In one paragraph

Article in Human brain mapping, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Epigenetic MRI: Noninvasive imaging of DNA methylation in the brain.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. The role of BDNF methylation and ValHuman brain mapping · 2020
    Article
  8. Analytical Value of Cell-Free DNA Based onFrontiers in psychiatry · 2019
    Article
  9. Article
  10. Association of Serotonin Transporter Gene AluJb Methylation with Major Depression, Amygdala Responsiveness, 5-HTTLPR/rs25531 Polymorphism, and Stress.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2018
    Article
  11. Review
  12. Warning SINEs: Alu elements, evolution of the human brain, and the spectrum of neurological disease.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2018
    Review
  13. Longitudinal epigenetic predictors of amygdala:hippocampus volume ratio.Journal of child psychology and psychiatry, and allied disciplines · 2017
    Article
  14. Review
  15. Article
  16. Imaging genetics in neurodevelopmental psychopathology.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Udo DannlowskiDepartment of Psychiatry, University of Münster, Münster, Germany; Department of Psychiatry, University of Marburg, Marburg, Germany.
Harald Kugel
Ronny Redlich
Adriane Halik
Ilona Schneider
Nils Opel
Dominik Grotegerd
Kathrin Schwarte
Christiane Schettler
Oliver Ambrée
Stephan Rust
Katharina Domschke
Volker Arolt
Walter Heindel
Bernhard T Baune
Thomas Suslow
Weiqi Zhang
Christa Hohoff
University of Münster · DELeipzig University · DEPhilipps University of Marburg · DEUniversity of Adelaide · AUUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe serotonin transporter (5-HTT) and the 5-HTTLPR/rs25531 polymorphisms in its gene (SLC6A4) have been associated with depression, increased stress-response, and brain structural alterations such as reduced hippocampal volumes. Recently, epigenetic processes including SLC6A4 promoter methylation were shown to be affected by stress, trauma, or maltreatment and are regarded to be involved in the etiology of affective disorders. However, neurobiological correlates of SLC6A4 promoter methylation have never been studied or compared to genotype effects by means of human neuroimaging hitherto

methodsHealthy subjects were recruited in two independent samples (N = 94, N = 95) to obtain structural gray matter images processed by voxel-based morphometry (VBM8), focusing on hippocampal, amygdala, and anterior cingulate gyrus gray matter structure. SLC6A4 promoter methylation within an AluJb element and 5-HTTLPR/rs25531 genotypes were analyzed in view of a possible impact on local gray matter volume

resultsStrong associations of AluJb methylation and hippocampal gray matter volumes emerged within each sample separately, which in the combined sample withstood most conservative alpha-corrections for the entire brain. The amygdala, insula, and caudate nucleus showed similar associations. The 5-HTTLPR/rs25531 showed no main effect on gray matter, and the effect of methylation rates on hippocampal structure was comparable among the genotype groups

conclusionsMethylation within the AluJb appears to have strong effects on hippocampal gray matter volumes, indicating that epigenetic processes can alter brain structures crucially involved in stress-related disorders. Different ways of regulating SLC6A4 expression might involve exonization or transcription factor binding as potentially underlying mechanisms, which, however, is speculative and warrants further investigation.

Indexed as

AdultBrain MappingDNA MethylationFemaleGenotypeGray MatterHippocampusHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedPolymorphism, GeneticPsychiatric Status Rating ScalesSerotonin Plasma Membrane Transport ProteinsYoung AdultSerotonin Plasma Membrane Transport Proteins5-HTTLRPAlu elementDNA methylationepigeneticshippocampusMRI

Identifiers

PMID24862560
PMCPMC6869452
OpenAlexW1939264572

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.