Evidence map›Paper›PMID 24861619›Full record

ArticleNucleic acids research2014

Bookmarking promoters in mitotic chromatin: poly(ADP-ribose)polymerase-1 as an epigenetic mark.

Niraj Lodhi, Andrew V Kossenkov, Alexei V Tulin

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Niraj LodhiFox Chase Cancer Center, Philadelphia, PA, 19111 USA.
Andrew V KossenkovThe Wistar Institute, Philadelphia PA, 19104 USA.
Alexei V TulinFox Chase Cancer Center, Philadelphia, PA, 19111 USA alexei.tulin@fccc.edu.
Fox Chase Cancer Center · USThe Wistar Institute · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
Novel Epigenetic Marks in MitosisR01DK082623 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI TULIN, ALEXEI V, ZARET, KENNETH · 2008 to 2010
$2.2M
Poly ADP-ribose Polymerase in Chromatin and Transcriptional RegulationR01GM077452 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI TULIN, ALEXEI V · 2008 to 2012
$1.6M
NCI NIH HHS P30 CA010815NIDDK NIH HHS R01 DK082623NIDDK NIH HHS R01DK082623NIGMS NIH HHS R01 GM077452
6 · The paper itself

Abstract

Epigenetics are the heritable changes in gene expression or cellular phenotype caused by mechanisms other than changes in the underlying DNA sequence. After mitosis, it is thought that bookmarking transcription factors remain at promoters, regulating which genes become active and which remain silent. Herein, we demonstrate that poly(ADP-ribose)polymerase-1 (PARP-1) is a genome-wide epigenetic memory mark in mitotic chromatin, and we further show that the presence of PARP-1 is absolutely crucial for reactivation of transcription after mitosis. Based on these findings, a novel molecular model of epigenetic memory transmission through the cell cycle is proposed.

Indexed as

Epigenesis, GeneticPromoter Regions, GeneticBinding SitesChromatinHEK293 CellsHistonesHumansMitosisNFATC Transcription FactorsNucleosomesPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesTranscription, GeneticTranscription Initiation SiteChromatinhistone H2A.F-ZHistonesNFATC Transcription FactorsNucleosomesPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerases

Identifiers

PMID24861619
PMCPMC4066802
OpenAlexW2106136726

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.