Evidence map›Paper›PMID 24860091›Full record

ArticleThe Journal of biological chemistry2014

Intact functional fourteen-subunit respiratory membrane-bound [NiFe]-hydrogenase complex of the hyperthermophilic archaeon Pyrococcus furiosus.

Patrick M McTernan, Sanjeev K Chandrayan, Chang-Hao Wu, Brian J Vaccaro, W Andrew Lancaster, Qingyuan Yang, Dax Fu, Greg L Hura, John A Tainer, Michael W W Adams

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. HApplied microbiology and biotechnology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Functional Dynamics of an Ancient Membrane-Bound Hydrogenase.Journal of the American Chemical Society · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Energy-converting hydrogenases: the link between HCellular and molecular life sciences : CMLS · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Patrick M McTernanFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229.
Sanjeev K ChandrayanFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229.
Chang-Hao WuFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229.
Brian J VaccaroFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229.
W Andrew LancasterFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229.
Qingyuan Yangthe Department of Physiology, John Hopkins University School of Medicine, Baltimore, Maryland 21205, and.
Dax Futhe Department of Physiology, John Hopkins University School of Medicine, Baltimore, Maryland 21205, and.
Greg L Hurathe Physical Bioscience Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
John A Tainerthe Physical Bioscience Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Michael W W AdamsFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602-7229, adams@bmb.uga.edu.

Funding

Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
MINOS (Macromolecular Insights on Nucleic acids Optimized by Scattering)R01GM105404 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI TAINER, JOHN A. · 2012 to 2015
$2.1M
Purchase of a Thermo Fisher Scientific LTQ Orbitrap XL Mass SpectrometerS10RR028859 · NCRR · UNIVERSITY OF GEORGIA · PI AMSTER, I JONATHAN · 2011 to 2011
$832k
NCRR NIH HHS S10 RR028859NIDDK NIH HHS P30 DK089502NIGMS NIH HHS GM105404NIGMS NIH HHS R01 GM105404
6 · The paper itself

Abstract

The archaeon Pyrococcus furiosus grows optimally at 100 °C by converting carbohydrates to acetate, CO2, and H2, obtaining energy from a respiratory membrane-bound hydrogenase (MBH). This conserves energy by coupling H2 production to oxidation of reduced ferredoxin with generation of a sodium ion gradient. MBH is encoded by a 14-gene operon with both hydrogenase and Na(+)/H(+) antiporter modules. Herein a His-tagged MBH was expressed in P. furiosus and the detergent-solubilized complex purified under anaerobic conditions by affinity chromatography. Purified MBH contains all 14 subunits by electrophoretic analysis (13 subunits were also identified by mass spectrometry) and had a measured iron:nickel ratio of 15:1, resembling the predicted value of 13:1. The as-purified enzyme exhibited a rhombic EPR signal characteristic of the ready nickel-boron state. The purified and membrane-bound forms of MBH both preferentially evolved H2 with the physiological donor (reduced ferredoxin) as well as with standard dyes. The O2 sensitivities of the two forms were similar (half-lives of ∼ 15 h in air), but the purified enzyme was more thermolabile (half-lives at 90 °C of 1 and 25 h, respectively). Structural analysis of purified MBH by small angle x-ray scattering indicated a Z-shaped structure with a mass of 310 kDa, resembling the predicted value (298 kDa). The angle x-ray scattering analyses reinforce and extend the conserved sequence relationships of group 4 enzymes and complex I (NADH quinone oxidoreductase). This is the first report on the properties of a solubilized form of an intact respiratory MBH complex that is proposed to evolve H2 and pump Na(+) ions.

Indexed as

Archaeal ProteinsCatalytic DomainCell MembraneCrystallography, X-RayElectron Transport Complex IHydrogenaseProtein Structure, QuaternaryPyrococcus furiosusArchaeal ProteinsElectron Transport Complex IHydrogenasenickel-iron hydrogenaseAffinity PurificationBioenergeticsElectron TransferHydrogenHydrogenaseMembrane EnzymeRespirationSolubilizationThermophile

Identifiers

PMID24860091
PMCPMC4094048

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.