Evidence map›Paper›PMID 24859116›Full record

ArticleNature chemical biology2014

An allosteric switch for pro-HGF/Met signaling using zymogen activator peptides.

Kyle E Landgraf, Micah Steffek, Clifford Quan, Jeffrey Tom, Christine Yu, Lydia Santell, Henry R Maun, Charles Eigenbrot, Robert A Lazarus

Abstract read
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In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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  4. The Journal of biological chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Kyle E Landgraf1] Department of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA. [2].
Micah Steffek1] Department of Structural Biology, Genentech, Inc., San Francisco, California, USA. [2].
Clifford QuanDepartment of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA.
Jeffrey TomDepartment of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA.
Christine YuDepartment of Structural Biology, Genentech, Inc., San Francisco, California, USA.
Lydia SantellDepartment of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA.
Henry R MaunDepartment of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA.
Charles EigenbrotDepartment of Structural Biology, Genentech, Inc., San Francisco, California, USA.
Robert A LazarusDepartment of Early Discovery Biochemistry, Genentech, Inc., San Francisco, California, USA.
Antigen Discovery (United States) · USInstitute for Structural Research · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stimulation of hepatocyte growth factor (HGF) signaling through the Met receptor is an attractive approach for promoting tissue repair and preventing fibrosis. Using structure-guided peptide phage display combined with an activity-based sorting strategy, we engineered allosteric activators of zymogen-like pro-HGF to bypass proteolytic activation and reversibly stimulate pro-HGF signaling through Met. Biochemical, structural and biological data showed that zymogen activator peptides (ZAPtides) potently and selectively bind the activation pocket within the serine protease-like β-chain of pro-HGF and display titratable activation of pro-HGF-dependent Met signaling, leading to cell survival and migration. To further demonstrate the versatility of our ZAPtide platform, we identified allosteric activators for pro-macrophage stimulating protein and a zymogen serine protease, Protein C, which also provides evidence for target selectivity. These studies reveal that ZAPtides use molecular mimicry of the trypsin-like N-terminal insertion mechanism and establish a new paradigm for selective pharmacological activation of plasminogen-related growth factors and zymogen serine proteases.

Indexed as

Allosteric RegulationAllosteric SiteAmino Acid SequenceAnimalsCatalytic DomainCell MovementCell SurvivalCHO CellsCricetulusGene Expression RegulationHepatocyte Growth FactorHumansModels, MolecularMolecular MimicryMolecular Sequence DataPeptide LibraryHepatocyte Growth Factormacrophage stimulating proteinMET protein, humanPeptide LibraryPeptidespro-hepatocyte growth factorProtein CProtein PrecursorsProto-Oncogene ProteinsProto-Oncogene Proteins c-met

Identifiers

PMID24859116
OpenAlexW2077831260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.