ArticleMolecular genetics and genomics : MGG2014
Genome-wide identification, characterisation and expression analysis of the MADS-box gene family in Prunus mume.
Article in Molecular genetics and genomics : MGG, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.
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55 citing papers in PubMed.
- Integrated Phylogenomic and Expression Analyses Reveal Lineage-Specific Loss of the Mβ Subfamily and Regulatory Diversification of MADS-Box Genes in Pepper.Plants (Basel, Switzerland) · 2026Article
- Novel insight of the SVP gene involved in pedicel length based on genomics analysis in cherry.Plant cell reports · 2025Article
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- Genome-wide identification of a MADS-box transcription factor family and their expression during floral development in Coptis teeta wall.BMC plant biology · 2024Article
- Monitoring Fruit Growth and Development in Apricot (International journal of molecular sciences · 2024Article
- Omics approaches to understand the MADS-box gene family in common bean (Phaseolus vulgaris L.) against drought stress.Protoplasma · 2024Article
- Chromosome-level genome assembly provides insights into the genetic diversity, evolution, and flower development of Prunus conradinae.Molecular horticulture · 2024Article
- Genome-wide analysis of PvMADS in common bean and functional characterization of PvMADS31 in Arabidopsis thaliana as a player in abiotic stress responses.The plant genome · 2024Article
- Genome-Wide Characterization and Phylogenetic and Stress Response Expression Analysis of the MADS-Box Gene Family in Litchi (International journal of molecular sciences · 2024Article
- A 49-bp deletion ofHorticulture research · 2024Article
- Integrative transcriptomic and metabolomic analyses reveal the phenylpropanoid and flavonoid biosynthesis of Prunus mume.Journal of plant research · 2024Article
- Genome-Wide Identified MADS-Box Genes inPlants (Basel, Switzerland) · 2023Article
- Chromosome-scale genome assembly ofHorticulture research · 2023Article
- Genome-wide characterization and expression analysis of MADS-box transcription factor gene family inFrontiers in plant science · 2023Article
- Characterization of the MADS-Box Gene Family inGenes · 2022Article
- Monitoring Apricot (International journal of molecular sciences · 2022Article
- Identification and Characterization of the MIKC-Type MADS-Box Gene Family inInternational journal of molecular sciences · 2022Article
- The collaborative mode byFrontiers in plant science · 2022Article
- Genome-Wide Identification MIKC-Type MADS-Box Gene Family and Their Roles during Development of Floral Buds in Wheel Wingnut (International journal of molecular sciences · 2021Article
- Identification of early and late flowering time candidate genes in endodormant and ecodormant almond flower buds.Tree physiology · 2021Article
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MADS-box genes encode transcription factors that play crucial roles in plant development, especially in flower and fruit development. To gain insight into this gene family in Prunus mume, an important ornamental and fruit plant in East Asia, and to elucidate their roles in flower organ determination and fruit development, we performed a genome-wide identification, characterisation and expression analysis of MADS-box genes in this Rosaceae tree. In this study, 80 MADS-box genes were identified in P. mume and categorised into MIKC, Mα, Mβ, Mγ and Mδ groups based on gene structures and phylogenetic relationships. The MIKC group could be further classified into 12 subfamilies. The FLC subfamily was absent in P. mume and the six tandemly arranged DAM genes might experience a species-specific evolution process in P. mume. The MADS-box gene family might experience an evolution process from MIKC genes to Mδ genes to Mα, Mβ and Mγ genes. The expression analysis suggests that P. mume MADS-box genes have diverse functions in P. mume development and the functions of duplicated genes diverged after the duplication events. In addition to its involvement in the development of female gametophytes, type I genes also play roles in male gametophytes development. In conclusion, this study adds to our understanding of the roles that the MADS-box genes played in flower and fruit development and lays a foundation for selecting candidate genes for functional studies in P. mume and other species. Furthermore, this study also provides a basis to study the evolution of the MADS-box family.
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