Evidence map›Paper›PMID 24857660›Full record

ArticleCell reports2014

Targeting polycomb to pericentric heterochromatin in embryonic stem cells reveals a role for H2AK119u1 in PRC2 recruitment.

Sarah Cooper, Martin Dienstbier, Raihann Hassan, Lothar Schermelleh, Jafar Sharif, Neil P Blackledge, Valeria De Marco, Sarah Elderkin, Haruhiko Koseki, Robert Klose and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 206 papers.

0numbers the graph read from it
0cells of the map it votes in
206citing papers in PubMed
18.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

206 citing papers in PubMed, 327 citations in OpenAlex.

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  16. HISTONE DEACETYLASE-1 is required for epigenome stability inProceedings of the National Academy of Sciences of the United States of America · 2025
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146 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Sarah CooperDevelopmental Epigenetics, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Martin DienstbierCGAT, MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT, UK.
Raihann HassanDevelopmental Epigenetics, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Lothar SchermellehAdvanced Cellular Imaging, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Jafar SharifLaboratory for Developmental Genetics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro, Tsurumi-ku, Yokohama 230-0045, Japan.
Neil P BlackledgeChromatin Biology and Transcription, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Valeria De MarcoMRC National Institute for Medical Research, The Ridgeway, Mill Hill, London NW7 1AA, UK.
Sarah ElderkinNuclear Dynamics, Babraham Institute, Babraham Research Campus, Cambridge CB22 3AT, UK.
Haruhiko KosekiLaboratory for Developmental Genetics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro, Tsurumi-ku, Yokohama 230-0045, Japan.
Robert KloseChromatin Biology and Transcription, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Andreas HegerCGAT, MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT, UK.
Neil BrockdorffDevelopmental Epigenetics, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK. Electronic address: neil.brockdorff@bioch.ox.ac.uk.
University of Oxford · GBRIKEN Center for Integrative Medical Sciences · JPBabraham Institute · GBGenomics (United Kingdom) · GBThe Francis Crick Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/B/0000H234Biotechnology and Biological Sciences Research Council BBS/E/B/0000L748Medical Research Council G1000902Medical Research Council MC_EX_G1000902Medical Research Council MC_EX_UU_G1000902Wellcome Trust 091911Wellcome Trust 103768Wellcome Trust WT081385Wellcome Trust WT098024
6 · The paper itself

Abstract

The mechanisms by which the major Polycomb group (PcG) complexes PRC1 and PRC2 are recruited to target sites in vertebrate cells are not well understood. Building on recent studies that determined a reciprocal relationship between DNA methylation and Polycomb activity, we demonstrate that, in methylation-deficient embryonic stem cells (ESCs), CpG density combined with antagonistic effects of H3K9me3 and H3K36me3 redirects PcG complexes to pericentric heterochromatin and gene-rich domains. Surprisingly, we find that PRC1-linked H2A monoubiquitylation is sufficient to recruit PRC2 to chromatin in vivo, suggesting a mechanism through which recognition of unmethylated CpG determines the localization of both PRC1 and PRC2 at canonical and atypical target sites. We discuss our data in light of emerging evidence suggesting that PcG recruitment is a default state at licensed chromatin sites, mediated by interplay between CpG hypomethylation and counteracting H3 tail modifications.

Indexed as

Amino Acid SequenceAnimalsCell LineCpG IslandsDNA MethylationEmbryonic Stem CellsHeterochromatinHistonesMiceMolecular Sequence DataPolycomb Repressive Complex 2Protein BindingProtein Structure, TertiaryUbiquitinationHeterochromatinHistonesPolycomb Repressive Complex 2

Identifiers

PMID24857660
PMCPMC4062935
OpenAlexW2018865924

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.