Evidence map›Paper›PMID 24852749›Full record

ArticlePloS one2014

Genotoxic Klebsiella pneumoniae in Taiwan.

Yi-Chyi Lai, Ann-Chi Lin, Ming-Ko Chiang, Yu-Han Dai, Chih-Chieh Hsu, Min-Chi Lu, Chun-Yi Liau, Ying-Tsong Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 81 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Frontiers in microbiology · 2026
    Review
  5. Glycoconjugate Vaccines Against Nosocomial Klebsiella pneumoniae Infections.Advances in experimental medicine and biology · 2026
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  6. Review
  7. Mobile genetic elements inJournal of bacteriology · 2025
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  8. HypervirulentPharmaceuticals (Basel, Switzerland) · 2025
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  10. Prevalence and Molecular Characteristics ofInfection and drug resistance · 2025
    Article
  11. Article
  12. Enhanced invasion and survival of antibiotic- resistantFrontiers in cellular and infection microbiology · 2025
    Article
  13. Article
  14. Genetic and Functional Analysis of theMicrobiology spectrum · 2023
    Article
  15. Targeted depletion ofmSystems · 2023
    Article
  16. Review
  17. Article
  18. Article
  19. The making of hypervirulent Klebsiella pneumoniae.Journal of clinical laboratory analysis · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Yi-Chyi LaiDepartment of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan; Division of Infectious Diseases, Department of Internal Medicine, Chung-Shan Medical University Hospital, Taichung City, Taiwan; Institute of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan.
Ann-Chi LinInstitute of Molecular and Genomic Medicine, National Health Research Institutes, Miaoli County, Taiwan.
Ming-Ko ChiangDepartment of Life Science, National Chung Cheng University, Chia-Yi County, Taiwan.
Yu-Han DaiInstitute of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan.
Chih-Chieh HsuInstitute of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan.
Min-Chi LuDepartment of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan; Division of Infectious Diseases, Department of Internal Medicine, Chung-Shan Medical University Hospital, Taichung City, Taiwan; Institute of Microbiology and Immunology, Chung-Shan Medical University, Taichung City, Taiwan.
Chun-Yi LiauInstitute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan.
Ying-Tsong ChenInstitute of Molecular and Genomic Medicine, National Health Research Institutes, Miaoli County, Taiwan; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan; Biotechnology Center, National Chung Hsing University, Taichung City, Taiwan.
Chung Shan Medical University · TWNational Chung Hsing University · TWChung Shan Medical University Hospital · TWNational Chung Cheng University · TWNational Health Research Institutes · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundColibactin is a nonribosomal peptide-polyketide synthesized by multi-enzyme complexes encoded by the pks gene cluster. Colibactin-producing Escherichia coli have been demonstrated to induce host DNA damage and promote colorectal cancer (CRC) development. In Taiwan, the occurrence of pyogenic liver abscess (PLA) has been suggested to correlate with an increasing risk of CRC, and Klebsiella pneumoniae is the predominant PLA pathogen in Taiwan. METHODOLOGY/PRINCIPAL

findingsAt the asn tRNA loci of the newly sequenced K. pneumoniae 1084 genome, we identified a 208-kb genomic island, KPHPI208, of which a module identical to the E. coli pks colibactin gene cluster was recognized. KPHPI208 consists of eight modules, including the colibactin module and the modules predicted to be involved in integration, conjugation, yersiniabactin production, microcin production, and unknown functions. Transient infection of BALB/c normal liver cells with K. pneumoniae 1084 increased the phosphorylation of histone H2AX, indicating the induction of host DNA damage. Colibactin was required for the genotoxicity of K. pneumoniae 1084, as it was diminished by deletion of clbA gene and restored to the wild type level by trans-complementation with a clbA coding plasmid. Besides, BALB/c mice infected with K. pneumoniae 1084 exhibited enhanced DNA damage in the liver parenchymal cells when compared to the isogenic clbA deletion mutant. By PCR detection, the prevalence of pks-positive K. pneumoniae in Taiwan is 25.6%, which is higher than that reported in Europe (3.5%), and is significantly correlated with K1 type, which predominantly accounted for PLA in Taiwan.

conclusionsOur knowledge regarding how bacteria contribute to carcinogenesis has just begun. The identification of genotoxic K. pneumoniae and its genetic components will facilitate future studies to elucidate the molecular basis underlying the link between K. pneumoniae, PLA, and CRC.

Indexed as

Multigene FamilyAnimalsCell LineDNA DamageGene DeletionGenes, BacterialHumansKlebsiella InfectionsKlebsiella pneumoniaeLiverLiver Abscess, PyogenicMice, Inbred BALB CMutagensPeptidesPolyketidesTaiwancolibactinMutagensPeptidesPolyketides

Identifiers

PMID24852749
PMCPMC4031060
OpenAlexW2078095167

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.