Evidence map›Paper›PMID 24849136›Full record

ArticleDevelopment, growth & differentiation2014

MicroRNA expression profiling of the developing murine upper lip.

Dennis R Warner, Partha Mukhopadhyay, Guy Brock, Cindy L Webb, M Michele Pisano, Robert M Greene

Open access · greenAbstract read
In one paragraph

Article in Development, growth & differentiation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Trial
  2. Article
  3. MicroRNAs and Gene Regulatory Networks Related to Cleft Lip and Palate.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
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  10. Review
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  12. Article
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  19. Article
  20. MicroRNAs in Palatogenesis and Cleft Palate.Frontiers in physiology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dennis R WarnerDepartment of Molecular, Cellular, and Craniofacial Biology, University of Louisville Birth Defects Center, Louisville, Kentucky, USA.
Partha Mukhopadhyay
Guy Brock
Cindy L Webb
M Michele Pisano
Robert M Greene
University of Louisville · US

Funding

U-SHAPED DEVELOPMENT IN INFANT COGNITION AND PERCEPTIONP20RR017702 · NCRR · UNIVERSITY OF LOUISVILLE · PI CAI, JUN · 2002 to 2011
$15.0M
Molecular Determinants of Developmental DefectsP20GM103453 · NIGMS · UNIVERSITY OF LOUISVILLE · PI GREENE, ROBERT M · 2012 to 2012
$1.7M
Transcriptional Coactivators and Pregnancy OutcomesR01HD053509 · NICHD · UNIVERSITY OF LOUISVILLE · PI GREENE, ROBERT M · 2008 to 2012
$1.5M
NUTRITIONAL EPIGENETICS AND OROFACIAL DEVELOPMENTR01DE018215 · NIDCR · UNIVERSITY OF LOUISVILLE · PI GREENE, ROBERT M · 2008 to 2011
$1.3M
SIGNAL TRANSDUCTION DURING CRANIOFACIAL EMBRYOGENESISR01DE005550 · NIDCR · UNIVERSITY OF LOUISVILLE · PI GREENE, ROBERT M · 1985 to 2004
$907k
TGFBETA SIGNALING DURING CRANIOFACIAL DEVELOPMENTR01DE012858 · NIDCR · UNIVERSITY OF LOUISVILLE · PI GREENE, ROBERT M · 1999 to 2002
$538k
NCRR NIH HHS P20 RR017702NICHD NIH HHS HD053509NICHD NIH HHS R01 HD053509NIDCR NIH HHS DE018215NIDCR NIH HHS R01 DE005550NIDCR NIH HHS R01 DE012858NIDCR NIH HHS R01 DE018215NIGMS NIH HHS P20 GM103453
6 · The paper itself

Abstract

Clefts of the lip and palate are thought to be caused by genetic and environmental insults but the role of epigenetic mechanisms underlying this common birth defect are unknown. We analyzed the expression of over 600 microRNAs in the murine medial nasal and maxillary processes isolated on GD10.0-GD11.5 to identify those expressed during development of the upper lip and analyzed spatial expression of a subset. A total of 142 microRNAs were differentially expressed across gestation days 10.0-11.5 in the medial nasal processes, and 66 in the maxillary processes of the first branchial arch with 45 common to both. Of the microRNAs exhibiting the largest percent increase in both facial processes were five members of the Let-7 family. Among those with the greatest decrease in expression from GD10.0 to GD11.5 were members of the microRNA-302/367 family that have been implicated in cellular reprogramming. The distribution of expression of microRNA-199a-3p and Let-7i was determined by in situ hybridization and revealed widespread expression in both medial nasal and maxillary facial process, while that for microRNA-203 was much more limited. MicroRNAs are dynamically expressed in the tissues that form the upper lip and several were identified that target mRNAs known to be important for its development, including those that regulate the two main isoforms of p63 (microRNA-203 and microRNA-302/367 family). Integration of these data with corresponding proteomic datasets will lead to a greater appreciation of epigenetic regulation of lip development and provide a better understanding of potential causes of cleft lip.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsFemaleGene Expression ProfilingIn Situ HybridizationLipMiceMicroRNAsPhosphoproteinsPregnancyTrans-ActivatorsMicroRNAsPhosphoproteinsTrans-ActivatorsTrp63 protein, mousecleft lipcraniofacial developmentmicroRNAmousep63

Identifiers

PMID24849136
PMCPMC4379120
OpenAlexW2057983634

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.