Evidence map›Paper›PMID 24845860›Full record

ArticleNature communications2014

Retinoic acid signalling regulates the development of tonotopically patterned hair cells in the chicken cochlea.

Benjamin R Thiede, Zoë F Mann, Weise Chang, Yuan-Chieh Ku, Yena K Son, Michael Lovett, Matthew W Kelley, Jeffrey T Corwin

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 48 citations in OpenAlex.

  1. Retinoic acid receptor assembly dynamics governs dual functions in cochlear organogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  9. Single-cell transcriptomic profiling of the mouse cochlea: An atlas for targeted therapies.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Follistatin regulates the specification of the apical cochlea responsible for low-frequency hearing in mammals.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
  12. Article
  13. Norrie disease protein is essential for cochlear hair cell maturation.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  20. Wnt9a Can Influence Cell Fates and Neural Connectivity across the Radial Axis of the Developing Cochlea.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Benjamin R ThiedeDepartment of Neuroscience, University of Virginia School of Medicine, 409 Lane Road, Charlottesville, Virginia 22908, USA.
Zoë F MannLaboratory of Cochlear Development, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, 35A Convent Drive, Bethesda, Maryland 20892-3729, USA.
Weise ChangLaboratory of Cochlear Development, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, 35A Convent Drive, Bethesda, Maryland 20892-3729, USA.
Yuan-Chieh KuDivision of Human Genetics, Department of Genetics, Washington University School of Medicine, St Louis, Missouri 63110, USA.
Yena K SonDepartment of Neuroscience, University of Virginia School of Medicine, 409 Lane Road, Charlottesville, Virginia 22908, USA.
Michael LovettDivision of Human Genetics, Department of Genetics, Washington University School of Medicine, St Louis, Missouri 63110, USA.
Matthew W KelleyLaboratory of Cochlear Development, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, 35A Convent Drive, Bethesda, Maryland 20892-3729, USA.
Jeffrey T Corwin1] Department of Neuroscience, University of Virginia School of Medicine, 409 Lane Road, Charlottesville, Virginia 22908, USA [2] Department of Cell Biology, University of Virginia School of Medicine, 409 Lane Road, Charlottesville, Virginia 22908, USA.
University of Virginia · USNational Institutes of Health · USWashington University in St. Louis · USNational Institute on Deafness and Other Communication Disorders · US

Funding

Hair Cell Development in the Mammalian CochleaZIADC000059 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI KELLEY, MATTHEW · 2009 to 2025
$41.8M
GROWTH AND REGENERATION IN THE INNER EARR01DC000200 · NIDCD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI CORWIN, JEFFREY T · 1989 to 2018
$9.7M
Genomic approaches to inner ear hair cell regenerationRC1DC010677 · NIDCD · WASHINGTON UNIVERSITY · PI LOVETT, MICHAEL · 2009 to 2010
$996k
Patterning the tonotopic axis of the cochleaF31DC012485 · NIDCD · UNIVERSITY OF VIRGINIA · PI THIEDE, BENJAMIN R · 2012 to 2013
$59k
NIDCD NIH HHS F31 DC012485NIDCD NIH HHS R01 DC000200NIDCD NIH HHS RC1 DC010677
6 · The paper itself

Abstract

Precise frequency discrimination is a hallmark of auditory function in birds and mammals and is required for distinguishing similar sounding words, like 'bat,' 'cat' and 'hat.' In the cochlea, tuning and spectral separation result from longitudinal differences in basilar membrane stiffness and numerous individual gradations in sensory hair cell phenotypes, but it is unknown what patterns the phenotypes. Here we used RNA-seq to compare transcriptomes from proximal, middle and distal regions of the embryonic chicken cochlea, and found opposing longitudinal gradients of expression for retinoic acid (RA)-synthesizing and degrading enzymes. In vitro experiments showed that RA is necessary and sufficient to induce the development of distal-like hair cell phenotypes and promotes expression of the actin-crosslinking proteins, Espin and Fscn2. These and other findings highlight a role for RA signalling in patterning the development of a longitudinal gradient of frequency-tuned hair cell phenotypes in the cochlea.

Indexed as

Gene Expression Regulation, DevelopmentalAldehyde OxidoreductasesAnimalsBasilar MembraneCarrier ProteinsChick EmbryoCytochrome P-450 Enzyme SystemHair Cells, AuditoryMicrofilament ProteinsReceptors, Retinoic AcidRNA, MessengerSignal TransductionTretinoinaldehyde dehydrogenase (NAD(P)+)Aldehyde OxidoreductasesCarrier ProteinsCytochrome P-450 Enzyme SystemfascinMicrofilament ProteinsReceptors, Retinoic Acidretinoic acid binding protein I, cellularRNA, MessengerTretinoin

Identifiers

PMID24845860
PMCPMC4311773
OpenAlexW2092088861

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.