Evidence map›Paper›PMID 24845106›Full record

ArticleMolecular therapy. Nucleic acids2014

Human metapneumovirus infection induces significant changes in small noncoding RNA expression in airway epithelial cells.

Junfang Deng, Ryan N Ptashkin, Qingrong Wang, Guangliang Liu, Guanping Zhang, Inhan Lee, Yong Sun Lee, Xiaoyong Bao

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 41 citations in OpenAlex.

  1. Circulating microRNA profiles predict the severity of COVID-19 in hospitalized patients.Translational research : the journal of laboratory and clinical medicine · 2021
    Trial
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Receptors and host factors: key players in human metapneumovirus infection.Frontiers in cellular and infection microbiology · 2025
    Review
  8. Review
  9. Article
  10. miRNAs as Modern Biomarkers in Asthma Therapy.International journal of molecular sciences · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Junfang Deng1] Department of Pediatrics, University of Texas Medical Branch, Galveston, Texas, USA [2] Department of Hepatobiliary Surgery, The First Affiliated Hospital, College of Medicine, Zhejiang University, Zhejiang, China.
Ryan N Ptashkin1] miRcore, Ann Arbor, Michigan, USA [2] Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.
Qingrong WangDepartment of Pediatrics, University of Texas Medical Branch, Galveston, Texas, USA.
Guangliang Liu1] Department of Pediatrics, University of Texas Medical Branch, Galveston, Texas, USA [2] Department of Otorhinolaryngology, Sixth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China.
Guanping ZhangDepartment of Otorhinolaryngology, Sixth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China.
Inhan LeemiRcore, Ann Arbor, Michigan, USA.
Yong Sun LeeDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas, USA.
Xiaoyong Bao1] Department of Pediatrics, University of Texas Medical Branch, Galveston, Texas, USA [2] Institute for Translational Science, University of Texas Medical Branch, Galveston, Texas, USA.
The University of Texas Medical Branch at Galveston · USSixth Affiliated Hospital of Sun Yat-sen University · CNSun Yat-sen University · CNUniversity of Michigan–Ann Arbor · USZhejiang University · CN

Funding

tRNA-derived RNA Fragments (tRFs) and their Functions in Respiratory Syncytial Virus (RSV) InfectionR01AI116812 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI BAO, XIAOYONG · 2016 to 2020
$1.9M
Functional Portraits of tRNA-derived Small Non-coding RNAsR21AI113771 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI BAO, XIAOYONG · 2015 to 2016
$426k
Cellular responses to human metapneumovirus infectionK22AI074829 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI BAO, XIAOYONG · 2010 to 2011
$270k
NIAID NIH HHS K22 AI074829NIAID NIH HHS R01 AI116812NIAID NIH HHS R21 AI113771
6 · The paper itself

Abstract

Small noncoding RNAs (sncRNAs), such as microRNAs (miRNA), virus-derived sncRNAs, and more recently identified tRNA-derived RNA fragments, are critical to posttranscriptional control of genes. Upon viral infection, host cells alter their sncRNA expression as a defense mechanism, while viruses can circumvent host defenses and promote their own propagation by affecting host cellular sncRNA expression or by expressing viral sncRNAs. Therefore, characterizing sncRNA profiles in response to viral infection is an important tool for understanding host-virus interaction, and for antiviral strategy development. Human metapneumovirus (hMPV), a recently identified pathogen, is a major cause of lower respiratory tract infections in infants and children. To investigate whether sncRNAs play a role in hMPV infection, we analyzed the changes in sncRNA profiles of airway epithelial cells in response to hMPV infection using ultrahigh-throughput sequencing. Of the cloned sncRNAs, miRNA was dominant in A549 cells, with the percentage of miRNA increasing in a time-dependent manner after the infection. In addition, several hMPV-derived sncRNAs and corresponding ribonucleases for their biogenesis were identified. hMPV M2-2 protein was revealed to be a key viral protein regulating miRNA expression. In summary, this study revealed several novel aspects of hMPV-mediated sncRNA expression, providing a new perspective on hMPV-host interactions.

Identifiers

PMID24845106
PMCPMC4040629
OpenAlexW2037694838

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.