Evidence map›Paper›PMID 24844597›Full record

ArticlePloS one2014

An investigation of the diversity of strains of enteroaggregative Escherichia coli isolated from cases associated with a large multi-pathogen foodborne outbreak in the UK.

Timothy J Dallman, Marie A Chattaway, Lauren A Cowley, Michel Doumith, Rediat Tewolde, David J Wooldridge, Anthony Underwood, Derren Ready, John Wain, Kirsty Foster and 2 more

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. EnteroaggregativeEcoSal Plus · 2025
    Review
  2. Microbiology and epidemiology of enteroaggregativeJournal of medical microbiology · 2025
    Article
  3. Article
  4. Article
  5. Article
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  8. Article
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  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Whole genome sequencing reveals high clonal diversity ofAntimicrobial resistance and infection control · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Seeding and Establishment of Legionella pneumophila in Hospitals: Implications for Genomic Investigations of Nosocomial Legionnaires' Disease.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Timothy J DallmanGastrointestinial Bacteria Reference Unit, Public Health England, London, United Kingdom.
Marie A ChattawayGastrointestinial Bacteria Reference Unit, Public Health England, London, United Kingdom.
Lauren A CowleyGastrointestinial Bacteria Reference Unit, Public Health England, London, United Kingdom.
Michel DoumithAntimicrobial Resistance and Healthcare Associated Infections Reference Unit, Public Health England, London, United Kingdom.
Rediat TewoldeApplied Laboratory and Bio- Informatics Unit, Public Health England, London, United Kingdom.
David J WooldridgeDepartment for Bio-analysis and Horizon Technologies, Next Generation Sequencing, Public Health England, London, United Kingdom.
Anthony UnderwoodApplied Laboratory and Bio- Informatics Unit, Public Health England, London, United Kingdom.
Derren ReadyPublic Health Laboratory London, Barts & The London Hospital Trust, London, United Kingdom.
John WainInnovation Centre, University of East Anglia, Norwich, United Kingdom.
Kirsty FosterNorth East Public Health England Centre, Newcastle upon Tyne, United Kingdom.
Kathie A GrantGastrointestinial Bacteria Reference Unit, Public Health England, London, United Kingdom.
Claire JenkinsGastrointestinial Bacteria Reference Unit, Public Health England, London, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Following a large outbreak of foodborne gastrointestinal (GI) disease, a multiplex PCR approach was used retrospectively to investigate faecal specimens from 88 of the 413 reported cases. Gene targets from a range of bacterial GI pathogens were detected, including Salmonella species, Shigella species and Shiga toxin-producing Escherichia coli, with the majority (75%) of faecal specimens being PCR positive for aggR associated with the Enteroaggregative E. coli (EAEC) group. The 20 isolates of EAEC recovered from the outbreak specimens exhibited a range of serotypes, the most frequent being O104:H4 and O131:H27. None of the EAEC isolates had the Shiga toxin (stx) genes. Multilocus sequence typing and single nucleotide polymorphism analysis of the core genome confirmed the diverse phylogeny of the strains. The analysis also revealed a close phylogenetic relationship between the EAEC O104:H4 strains in this outbreak and the strain of E. coli O104:H4 associated with a large outbreak of haemolytic ureamic syndrome in Germany in 2011. Further analysis of the EAEC plasmids, encoding the key enteroaggregative virulence genes, showed diversity with respect to FIB/FII type, gene content and genomic architecture. Known EAEC virulence genes, such as aggR, aat and aap, were present in all but one of the strains. A variety of fimbrial genes were observed, including genes encoding all five known fimbrial types, AAF/1 to AAF/V. The AAI operon was present in its entirety in 15 of the EAEC strains, absent in three and present, but incomplete, in two isolates. EAEC is known to be a diverse pathotype and this study demonstrates that a high level of diversity in strains recovered from cases associated with a single outbreak. Although the EAEC in this study did not carry the stx genes, this outbreak provides further evidence of the pathogenic potential of the EAEC O104:H4 serotype.

Indexed as

BiodiversityDisease OutbreaksChromosome MappingEscherichia coliEscherichia coli InfectionsFoodborne DiseasesGene OrderGenome, BacterialGenomicsGenotypeHigh-Throughput Nucleotide SequencingHumansMicrobial Sensitivity TestsMultilocus Sequence TypingOperonPhenotype

Identifiers

PMID24844597
PMCPMC4028294

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.