Evidence map›Paper›PMID 24843152›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Structure of the pseudokinase-kinase domains from protein kinase TYK2 reveals a mechanism for Janus kinase (JAK) autoinhibition.

Patrick J Lupardus, Mark Ultsch, Heidi Wallweber, Pawan Bir Kohli, Adam R Johnson, Charles Eigenbrot

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 119 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

119 citing papers in PubMed, 1 synthesis or guideline pooled it, 215 citations in OpenAlex.

  1. JAK inhibitors and COVID-19.Journal for immunotherapy of cancer · 2022
    Pooled it
  2. Article
  3. Modulating pseudokinase conformation from the ATP-binding site.Structure (London, England : 1993) · 2026
    Article
  4. Powassan Virus NS5 Antagonizes TYK2-Mediated Immune Signaling Pathways.bioRxiv : the preprint server for biology · 2026
    Article
  5. Review
  6. Article
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  9. High-Penetrance Rare Variants Underlying Familial Lung Cancer Risk: Insights From Genetic Epidemiology of Lung Cancer Consortium.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
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  11. Review
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59 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution.

Patrick J LupardusDepartments of Structural Biology and lupardus.patrick@gene.com eigenbrot.c@gene.com.
Mark UltschDepartments of Structural Biology and.
Heidi WallweberDepartments of Structural Biology and.
Pawan Bir KohliBiochemical and Cellular Pharmacology, Genentech, South San Francisco, CA 94080.
Adam R JohnsonBiochemical and Cellular Pharmacology, Genentech, South San Francisco, CA 94080.
Charles EigenbrotDepartments of Structural Biology and lupardus.patrick@gene.com eigenbrot.c@gene.com.
Genentech

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Janus kinases (JAKs) are receptor-associated multidomain tyrosine kinases that act downstream of many cytokines and interferons. JAK kinase activity is regulated by the adjacent pseudokinase domain via an unknown mechanism. Here, we report the 2.8-Å structure of the two-domain pseudokinase-kinase module from the JAK family member TYK2 in its autoinhibited form. We find that the pseudokinase and kinase interact near the kinase active site and that most reported mutations in cancer-associated JAK alleles cluster in or near this interface. Mutation of residues near the TYK2 interface that are analogous to those in cancer-associated JAK alleles, including the V617F and "exon 12" JAK2 mutations, results in increased kinase activity in vitro. These data indicate that JAK pseudokinases are autoinhibitory domains that hold the kinase domain inactive until receptor dimerization stimulates transition to an active state.

Indexed as

AnimalsCell LineCrystallography, X-RayDimerizationEnzyme ActivationHumansInsectaJanus Kinase 1Janus Kinase 2Janus Kinase 3MutationNeoplasmsProtein Structure, TertiarySignal TransductionStructure-Activity RelationshipTYK2 KinaseJAK1 protein, humanJAK2 protein, humanJAK3 protein, humanJanus Kinase 1Janus Kinase 2Janus Kinase 3TYK2 KinaseTYK2 protein, humanJAK1JAK3

Identifiers

PMID24843152
PMCPMC4050602
OpenAlexW2141682274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.