Evidence map›Paper›PMID 24842905›Full record

ArticleMolecular and cellular biology2014

KAP-1 promotes resection of broken DNA ends not protected by γ-H2AX and 53BP1 in G₁-phase lymphocytes.

Anthony T Tubbs, Yair Dorsett, Elizabeth Chan, Beth Helmink, Baeck-Seung Lee, Putzer Hung, Rosmy George, Andrea L Bredemeyer, Anuradha Mittal, Rohit V Pappu and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. THE GID COMPLEX REGULATES DNA END PROCESSING DURING DNA DOUBLE-STRAND BREAK REPAIR BY NONHOMOLOGOUS END JOINING.Transactions of the American Clinical and Climatological Association · 2025
    Article
  3. Article
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  6. Article
  7. Review
  8. Article
  9. Assessing DNA Damage Responses Using B Lymphocyte Cultures.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Bromodomain proteins: repairing DNA damage within chromatin.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  16. ATM loss leads to synthetic lethality in BRCA1 BRCT mutant mice associated with exacerbated defects in homology-directed repair.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Anthony T TubbsDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Yair DorsettDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Elizabeth ChanDepartment of Immunology, Duke University Medical Center, Durham, North Carolina, USA.
Beth HelminkDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Baeck-Seung LeeDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Putzer HungDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Rosmy GeorgeDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Andrea L BredemeyerDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Anuradha MittalDepartment of Biomedical Engineering and Center for Biological Systems Engineering, Washington University, St. Louis, Missouri, USA.
Rohit V PappuDepartment of Biomedical Engineering and Center for Biological Systems Engineering, Washington University, St. Louis, Missouri, USA.
Dipanjan ChowdhuryDepartment of Radiation Oncology, Harvard Medical School, Boston, Massachusetts, USA.
Nima MosammaparastDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Michael S KrangelDepartment of Immunology, Duke University Medical Center, Durham, North Carolina, USA.
Barry P SleckmanDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA sleckman@immunology.wustl.edu.
Washington University in St. Louis · USDuke Medical Center · USHarvard University · US

Funding

TRAINING PROGRAM IN IMMUNOLOGY AND IMMUNOGENETICST32AI007163 · NIAID · WASHINGTON UNIVERSITY · PI Kenneth M Murphy, Kodi S Ravichandran · 1985 to 2026
$14.8M
THE V(D)J RECOMBINATION REACTION AND ITS IMPACT ON LYMPHOCYTE DEVELOPMENTR01AI047829 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI SLECKMAN, BARRY P · 2000 to 2021
$7.0M
CONTROL OF TCR V BETA REARRANGEMENT &ALLELIC EXCLUSIONR01AI049934 · NIAID · DUKE UNIVERSITY · PI KRANGEL, MICHAEL S · 2001 to 2015
$6.8M
ATM FUNCTION DURING V(D)J RECOMBINATIONR01AI074953 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI SLECKMAN, BARRY P · 2009 to 2023
$5.9M
Basic Immunology Training ProgramT32AI052077 · NIAID · DUKE UNIVERSITY · PI KRANGEL, MICHAEL S · 2002 to 2024
$4.2M
Molecular mechanism and relevance of microRNAs in DSB repair pathway choiceR01CA142698 · NCI · DANA-FARBER CANCER INST · PI CHOWDHURY, DIPANJAN · 2010 to 2019
$3.8M
ACTIVATION OF CELLULAR SIGNALING PATHWAYS BY DNA DOUBLE STRAND BREAKSR01CA136470 · NCI · WASHINGTON UNIVERSITY · PI BASSING, CRAIG H, SLECKMAN, BARRY P · 2009 to 2013
$1.6M
Linking histone demethylation and the DNA damage response.K08CA158133 · NCI · WASHINGTON UNIVERSITY · PI MOSAMMAPARAST, NIMA · 2011 to 2015
$806k
NCI NIH HHS CA136470NCI NIH HHS K08 CA158133NCI NIH HHS R01 CA136470NCI NIH HHS R01 CA142698NIAID NIH HHS AI074953NIAID NIH HHS AI47829NIAID NIH HHS AI49934NIAID NIH HHS R01 AI047829NIAID NIH HHS R01 AI049934NIAID NIH HHS R01 AI074953NIAID NIH HHS T32 AI007163NIAID NIH HHS T32 AI052077
6 · The paper itself

Abstract

The resection of broken DNA ends is required for DNA double-strand break (DSB) repair by homologous recombination (HR) but can inhibit normal repair by nonhomologous end joining (NHEJ), the main DSB repair pathway in G1-phase cells. Antigen receptor gene assembly proceeds through DNA DSB intermediates generated in G1-phase lymphocytes by the RAG endonuclease. These DSBs activate ATM, which phosphorylates H2AX, forming γ-H2AX in flanking chromatin. γ-H2AX prevents CtIP from initiating resection of RAG DSBs. Whether there are additional proteins required to promote resection of these DNA ends is not known. KRAB-associated protein 1 (KAP-1) (TRIM28) is a transcriptional repressor that modulates chromatin structure and has been implicated in the repair of DNA DSBs in heterochromatin. Here, we show that in murine G1-phase lymphocytes, KAP-1 promotes resection of DSBs that are not protected by H2AX and its downstream effector 53BP1. In these murine cells, KAP-1 activity in DNA end resection is attenuated by a single-amino-acid change that reflects a KAP-1 polymorphism between primates and other mammalian species. These findings establish KAP-1 as a component of the machinery that can resect DNA ends in G1-phase cells and suggest that there may be species-specific features to this activity.

Indexed as

AnimalsCells, CulturedDNADNA-Binding ProteinsDNA Breaks, Double-StrandedDNA End-Joining RepairG1 PhaseHeterochromatinHistonesHumansIntracellular Signaling Peptides and ProteinsLymphocytesMiceMice, Inbred C57BLPhosphorylationDNADNA-Binding ProteinsHeterochromatinHistonesIntracellular Signaling Peptides and Proteins

Identifiers

PMID24842905
PMCPMC4135573
OpenAlexW2011502901

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.