Evidence map›Paper›PMID 24842877›Full record

ArticleeLife2014

Drastic changes in conformational dynamics of the antiterminator M2-1 regulate transcription efficiency in Pneumovirinae.

Cedric Leyrat, Max Renner, Karl Harlos, Juha T Huiskonen, Jonathan M Grimes

Open access · goldAbstract read
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
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  7. Journal of virology · 2024
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  16. Structures of theJournal of virology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Cedric LeyratDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Max RennerDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Karl HarlosDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Juha T HuiskonenDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, Oxford, United Kingdom.
Jonathan M GrimesDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, Oxford, United Kingdom Diamond Light Source Ltd, Didcot, United Kingdom jonathan@strubi.ox.ac.uk.
Centre for Human Genetics · GBDiamond Light Source · GB

Funding

Wellcome Trust 090532
6 · The paper itself

Abstract

The M2-1 protein of human metapneumovirus (HMPV) is a zinc-binding transcription antiterminator which is highly conserved among pneumoviruses. We report the structure of tetrameric HMPV M2-1. Each protomer features a N-terminal zinc finger domain and an α-helical tetramerization motif forming a rigid unit, followed by a flexible linker and an α-helical core domain. The tetramer is asymmetric, three of the protomers exhibiting a closed conformation, and one an open conformation. Molecular dynamics simulations and SAXS demonstrate a dynamic equilibrium between open and closed conformations in solution. Structures of adenosine monophosphate- and DNA- bound M2-1 establish the role of the zinc finger domain in base-specific recognition of RNA. Binding to 'gene end' RNA sequences stabilized the closed conformation of M2-1 leading to a drastic shift in the conformational landscape of M2-1. We propose a model for recognition of gene end signals and discuss the implications of these findings for transcriptional regulation in pneumoviruses.DOI: http://dx.doi.org/10.7554/eLife.02674.001.

Indexed as

Transcription, GeneticAdenosine MonophosphateAmino Acid SequenceCrystallography, X-RayDNAEdetic AcidHumansMetapneumovirusMolecular Dynamics SimulationMolecular Sequence DataProtein BindingProtein ConformationProtein MultimerizationProtein StabilityProtein SubunitsRNA, ViralAdenosine MonophosphateDNAEdetic AcidProtein SubunitsRNA, ViralSolutionsSolventsViral Proteinshuman metapneumovirusRNA polymerasestructural virologyvirus transcription

Identifiers

PMID24842877
PMCPMC4051120
OpenAlexW2168950008

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.