Evidence map›Paper›PMID 24842876›Full record

ArticleeLife2014

Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.

Grégory Verdon, SeCheol Oh, Ryan N Serio, Olga Boudker

Open access · goldAbstract read
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural basis of excitatory amino acid transporter 3 substrate recognition.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Conformational free energy landscape of a glutamate transporter and microscopic details of its transport mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Conformational free-energy landscapes of a NaProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Review
  11. Custom Design of a Humidifier Chamber forCrystal growth & design · 2024
    Article
  12. Article
  13. Article
  14. Distinct roles of the NaProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. High-speed atomic force microscopy reveals a three-state elevator mechanism in the citrate transporter CitS.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Linking function to global and local dynamics in an elevator-type transporter.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Grégory VerdonDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, United States g.verdon@imperial.ac.uk.
SeCheol OhDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, United States.
Ryan N SerioDepartment of Pharmacology, Weill Cornell Medical College, New York, United States.
Olga BoudkerDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, United States olb2003@med.cornell.edu.
Cornell University · US

Funding

Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Conformational Ensemble of Glutamate Transporters: Structure and IonicModulationR01NS064357 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BOUDKER, OLGA · 2009 to 2018
$3.8M
NIGMS NIH HHS P41 GM111244NINDS NIH HHS NS064357NINDS NIH HHS R01 NS064357
6 · The paper itself

Abstract

Membrane transporters that clear the neurotransmitter glutamate from synapses are driven by symport of sodium ions and counter-transport of a potassium ion. Previous crystal structures of a homologous archaeal sodium and aspartate symporter showed that a dedicated transport domain carries the substrate and ions across the membrane. Here, we report new crystal structures of this homologue in ligand-free and ions-only bound outward- and inward-facing conformations. We show that after ligand release, the apo transport domain adopts a compact and occluded conformation that can traverse the membrane, completing the transport cycle. Sodium binding primes the transport domain to accept its substrate and triggers extracellular gate opening, which prevents inward domain translocation until substrate binding takes place. Furthermore, we describe a new cation-binding site ideally suited to bind a counter-transported ion. We suggest that potassium binding at this site stabilizes the translocation-competent conformation of the unloaded transport domain in mammalian homologues.DOI: http://dx.doi.org/10.7554/eLife.02283.001.

Indexed as

Amino Acid Transport System X-AGBinding SitesCrystallography, X-RayIon Channel GatingIonsModels, MolecularProtein ConformationSodium ChannelsAmino Acid Transport System X-AGIonsSodium Channelscoupling mechanismcrystal structuresgatingglutamate transportersion binding sitemechanism

Identifiers

PMID24842876
PMCPMC4051121
OpenAlexW2116115666

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.