Evidence map›Paper›PMID 24842809›Full record

ArticlePloS one2014

Insights from the genome annotation of Elizabethkingia anophelis from the malaria vector Anopheles gambiae.

Phanidhar Kukutla, Bo G Lindberg, Dong Pei, Melanie Rayl, Wanqin Yu, Matthew Steritz, Ingrid Faye, Jiannong Xu

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 78 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Role of microbiota in host-Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2025
    Review
  4. Genomic profiling ofFrontiers in microbiology · 2025
    Article
  5. Microbial gatekeepers: midgut bacteria inFrontiers in microbiology · 2025
    Review
  6. Article
  7. Article
  8. Microorganisms · 2024
    Article
  9. Characterization of the Tissue and Strain-Specific Microbiota ofTropical medicine and infectious disease · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. The Integrative and Conjugative Element ICEMicrobiology spectrum · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Phanidhar KukutlaBiology Department, New Mexico State University, Las Cruces, New Mexico, United States of America.
Bo G LindbergDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Dong PeiBiology Department, New Mexico State University, Las Cruces, New Mexico, United States of America.
Melanie RaylDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Wanqin YuBiology Department, New Mexico State University, Las Cruces, New Mexico, United States of America.
Matthew SteritzBiology Department, New Mexico State University, Las Cruces, New Mexico, United States of America.
Ingrid FayeDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Jiannong XuBiology Department, New Mexico State University, Las Cruces, New Mexico, United States of America.
New Mexico State University · USStockholm University · SE

Funding

Bacterial colonization and immunogenicity in the mosquito gut ecosystemSC1AI112786 · NIAID · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI XU, JIANNONG · 2014 to 2017
$1.3M
Mosquito larval immunity and its impact on gut microbiota and malaria competenceSC2GM092789 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI XU, JIANNONG · 2011 to 2013
$417k
NIAID NIH HHS 1SC1AI112786NIAID NIH HHS SC1 AI112786NIGMS NIH HHS 1SC2GM092789NIGMS NIH HHS SC2 GM092789
6 · The paper itself

Abstract

Elizabethkingia anophelis is a dominant bacterial species in the gut ecosystem of the malaria vector mosquito Anopheles gambiae. We recently sequenced the genomes of two strains of E. anophelis, R26T and Ag1, isolated from different strains of A. gambiae. The two bacterial strains are identical with a few exceptions. Phylogenetically, Elizabethkingia is closer to Chryseobacterium and Riemerella than to Flavobacterium. In line with other Bacteroidetes known to utilize various polymers in their ecological niches, the E. anophelis genome contains numerous TonB dependent transporters with various substrate specificities. In addition, several genes belonging to the polysaccharide utilization system and the glycoside hydrolase family were identified that could potentially be of benefit for the mosquito carbohydrate metabolism. In agreement with previous reports of broad antibiotic resistance in E. anophelis, a large number of genes encoding efflux pumps and β-lactamases are present in the genome. The component genes of resistance-nodulation-division type efflux pumps were found to be syntenic and conserved in different taxa of Bacteroidetes. The bacterium also displays hemolytic activity and encodes several hemolysins that may participate in the digestion of erythrocytes in the mosquito gut. At the same time, the OxyR regulon and antioxidant genes could provide defense against the oxidative stress that is associated with blood digestion. The genome annotation and comparative genomic analysis revealed functional characteristics associated with the symbiotic relationship with the mosquito host.

Indexed as

PhylogenyAnimalsAnophelesDNA PrimersDrug Resistance, FungalFlavobacteriaceaeGastrointestinal TractGenome, BacterialInsect VectorsMolecular Sequence AnnotationSpecies SpecificityTerpenesDNA PrimersTerpenes

Identifiers

PMID24842809
PMCPMC4026382
OpenAlexW1996741520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.