Evidence map›Paper›PMID 24841271›Full record

ArticleAntimicrobial agents and chemotherapy2014

"Slow VISA," a novel phenotype of vancomycin resistance, found in vitro in heterogeneous vancomycin-intermediate Staphylococcus aureus strain Mu3.

Michie Saito, Yuki Katayama, Tomomi Hishinuma, Akira Iwamoto, Yoshifumi Aiba, Kyoko Kuwahara-Arai, Longzhu Cui, Miki Matsuo, Nanae Aritaka, Keiichi Hiramatsu

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Vancomycin Resistance inMicroorganisms · 2022
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Antibiotic Resistance and the MRSA Problem.Microbiology spectrum · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Michie SaitoDepartment of Infection Control Science, Graduate School of Medicine, Juntendo University, Tokyo, Japan.
Yuki KatayamaDepartment of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan.
Tomomi HishinumaDepartment of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan.
Akira IwamotoDepartment of Infection Control Science, Graduate School of Medicine, Juntendo University, Tokyo, Japan.
Yoshifumi AibaDepartment of Infection Control Science, Graduate School of Medicine, Juntendo University, Tokyo, Japan.
Kyoko Kuwahara-AraiDepartment of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan.
Longzhu CuiDepartment of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan.
Miki MatsuoDepartment of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan.
Nanae AritakaDivision of Hematology, Department of Medicine, Juntendo University Nerima Hospital, Tokyo, Japan.
Keiichi HiramatsuDepartment of Infection Control Science, Graduate School of Medicine, Juntendo University, Tokyo, Japan Department of Bacteriology, Faculty of Medicine, Juntendo University, Tokyo, Japan khiram06@juntendo.ac.jp.
Juntendo University · JPJuntendo University Nerima Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heterogeneous vancomycin-intermediate Staphylococcus aureus (hVISA) clinical strain Mu3 spontaneously generates VISA strains at an extremely high frequency (≥1×10(-6)). The generated VISA strains usually grow more slowly than does the parent hVISA strain, but they form colonies on vancomycin-containing agar plates before 48 h of incubation. However, we noticed a curious group of VISA strains, designated "slow VISA" (sVISA), whose colonies appear only after 72 h of incubation. They have extremely prolonged doubling times but have vancomycin MICs of 8 to ∼24 mg/liter when determined after 72 to ∼144 h of incubation. We established strain Mu3-6R-P (6R-P), which has a vancomycin MIC of 16 mg/liter (at 72 h), as a representative sVISA strain. Its cell wall was thickened and autolytic activity was decreased compared to the respective qualities of the parent hVISA strain Mu3. Whole-genome sequencing of 6R-P revealed only one mutation, encoded by rpoB (R512P), which replaced the 512th arginine of the RNA polymerase β-subunit with proline. Its VISA phenotype was unstable, and the strain frequently reverted to hVISA with concomitant losses of pinpoint colony morphology and cell wall thickness and reduced autolytic activity. Sequencing of the rpoB genes of the phenotypic revertant strains revealed mutations affecting the 512th codon, where the proline of 6R-P was replaced with leucine, serine, or histidine. Slow VISA generated in the tissues of an infected patient serves as a temporary shelter for hVISA to survive vancomycin therapy. The sVISA strain spontaneously returns to hVISA when the threat of vancomycin is lifted. The rpoB(R512P) mutation may be regarded as a regulatory mutation that switches the reversible phenotype of sVISA on and off.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsCell WallDNA-Directed RNA PolymerasesGenome, BacterialMicrobial Sensitivity TestsMutationPhenotypeStaphylococcus aureusVancomycinVancomycin ResistanceAnti-Bacterial AgentsBacterial ProteinsDNA-Directed RNA PolymerasesRNA polymerase beta subunitVancomycin

Identifiers

PMID24841271
PMCPMC4135821
OpenAlexW2096788134

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.