ArticleJournal of applied genetics2014
Genetic mapping of the ScHd1 gene in rye and an assessment of its relationship with earliness per se and plant morphology.
Article in Journal of applied genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
5 citing papers in PubMed.
- How Machine Learning Methods Helped Find Putative Rye Wax Genes Among GBS Data.International journal of molecular sciences · 2020Article
- Assessing the genetic diversity and characterizing genomic regions conferring Tan Spot resistance in cultivated rye.PloS one · 2019Article
- Article
- Comparative analysis of genetic architectures for nine developmental traits of rye.Journal of applied genetics · 2017Article
- Bidirectional selective genotyping approach for the identification of quantitative trait loci controlling earliness per se in winter rye (Secale cereale L.).Journal of applied genetics · 2016Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A fragment of the ScHd1 gene derived from eight inbred lines was sequenced and showed homology to other Hd1 genes from different cereals. Sequences were analysed with respect to the presence of a single-nucleotide polymorphism (SNP) difference. A C-T transition at position 312 of the consensus sequence was found, which distinguished two lines from the remaining six. The deduced amino acid sequence revealed a high identity (93%) to a Hd1-like protein from wheat. The identified mutation allowed the localisation of ScHd1 on a genetic map of rye (6RS). A small, statistically significant linkage between ScHd1 and earliness per se (eps) and some morphological traits was also established. The chromosomal region, including the S76 allele for the ScHd1 gene was linked to earlier heading, elongated spikes, a greater number of spikelets per spike and an increased weight of 1000 kernels.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.