Evidence map›Paper›PMID 24840115›Full record

ArticleAngewandte Chemie (International ed. in English)2014

Photoswitchable formation of a DNA interstrand cross-link by a coumarin-modified nucleotide.

Mohammad Mojibul Haque, Huabing Sun, Shuo Liu, Yinsheng Wang, Xiaohua Peng

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mohammad Mojibul HaqueDepartment of Chemistry and Biochemistry, University of Wisconsin Milwaukee, 3210 N. Cramer St., Milwaukee, WI 53211 (USA).
Huabing Sun
Shuo Liu
Yinsheng Wang
Xiaohua Peng

Funding

Repair of Radiation-Induced Crosslink Lesions of DNAR01ES019873 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2012 to 2016
$1.5M
New Radiation-Activated Antitumor Agents That Target HypoxiaR15CA152914 · NCI · UNIVERSITY OF WISCONSIN MILWAUKEE · PI PENG, XIAOHUA · 2010 to 2010
$359k
NCI NIH HHS 1R15CA152914-01NCI NIH HHS R15 CA152914NIEHS NIH HHS R01 ES019873
6 · The paper itself

Abstract

A coumarin-modified pyrimidine nucleoside (1) has been synthesized using a Cu(I)-catalyzed click reaction and incorporated into oligodeoxynucleotides (ODNs). Interstrand cross-links are produced upon irradiation of ODNs containing 1 at 350 nm. Cross-linking occurs through a [2+2] cycloaddition reaction with the opposing thymidine, 2'-deoxycytidine, or 2'-deoxyadenosine. A much higher reactivity was observed with dT than dC or dA. Irradiation of the dT-1 and dC-1 cross-linked products at 254 nm leads to a reversible ring-opening reaction, while such phenomena were not observed with dA-1 adducts. The reversible reaction is ultrafast and complete within 50-90 s. Consistent photoswitching behavior was observed over 6 cycles of irradiation at 350 nm and 254 nm. To the best of our knowledge, this is the first example of photoswitchable interstrand cross-linking formation induced by a modified pyrimidine nucleoside.

Indexed as

Base SequenceClick ChemistryCoumarinsCycloaddition ReactionDeoxyadenosinesDeoxycytidineDNAOligodeoxyribonucleotidesPyrimidine NucleosidesThymidineUltraviolet Rays2'-deoxyadenosinecoumarinCoumarinsDeoxyadenosinesDeoxycytidineDNAOligodeoxyribonucleotidesPyrimidine NucleosidesThymidineclick chemistrycycloadditionDNA cross-linkingnucleosidesphotoswitch

Identifiers

PMID24840115
PMCPMC4151308

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.