Evidence map›Paper›PMID 24840065›Full record

ArticleBiochemistry2014

How hydrogen peroxide is metabolized by oxidized cytochrome c oxidase.

Daniel Jancura, Jana Stanicova, Graham Palmer, Marian Fabian

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Radical in the Peroxide-Produced F-Type Ferryl Form of Bovine CytochromeInternational journal of molecular sciences · 2022
    Article
  4. Article
  5. ROS Defense Systems and Terminal Oxidases in Bacteria.Antioxidants (Basel, Switzerland) · 2021
    Review
  6. Article
  7. Antidotal Effects of the Phenothiazine Chromophore Methylene Blue Following Cyanide Intoxication.Toxicological sciences : an official journal of the Society of Toxicology · 2019
    Article
  8. Article
  9. Last Word on Viewpoint: Managing the power grid: how myoglobin can regulate PoJournal of applied physiology (Bethesda, Md. : 1985) · 2019
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 4 countries.

Daniel JancuraDepartment of Biophysics, University of P. J. Safarik , Kosice, Slovak Republic.
Jana Stanicova
Graham Palmer
Marian Fabian
University of Pavol Jozef Šafárik · SKCzech Academy of Sciences, Institute of Biophysics · CZRice University · US

Funding

Structure and function of cytochrome b561R01GM080575 · NIGMS · RICE UNIVERSITY · PI PALMER, GRAHAM A. · 2007 to 2010
$1.1M
Molecular mechanism of redox driven proton pumpsR01GM084348 · NIGMS · RICE UNIVERSITY · PI FABIAN, MARIAN · 2009 to 2010
$458k
NIGMS NIH HHS GM 080575NIGMS NIH HHS GM 084348
6 · The paper itself

Abstract

In the absence of external electron donors, oxidized bovine cytochrome c oxidase (CcO) exhibits the ability to decompose excess H2O2. Depending on the concentration of peroxide, two mechanisms of degradation were identified. At submillimolar peroxide concentrations, decomposition proceeds with virtually no production of superoxide and oxygen. In contrast, in the millimolar H2O2 concentration range, CcO generates superoxide from peroxide. At submillimolar concentrations, the decomposition of H2O2 occurs at least at two sites. One is the catalytic heme a3-CuB center where H2O2 is reduced to water. During the interaction of the enzyme with H2O2, this center cycles back to oxidized CcO via the intermediate presence of two oxoferryl states. We show that at pH 8.0 two molecules of H2O2 react with the catalytic center accomplishing one cycle. In addition, the reactions at the heme a3-CuB center generate the surface-exposed lipid-based radical(s) that participates in the decomposition of peroxide. It is also found that the irreversible decline of the catalytic activity of the enzyme treated with submillimolar H2O2 concentrations results specifically from the decrease in the rate of electron transfer from heme a to the heme a3-CuB center during the reductive phase of the catalytic cycle. The rates of electron transfer from ferrocytochrome c to heme a and the kinetics of the oxidation of the fully reduced CcO with O2 were not affected in the peroxide-modified CcO.

Indexed as

AnimalsCatalysisCattleElectron TransportElectron Transport Complex IVHydrogen PeroxideOxidation-ReductionOxidative StressPeroxidesElectron Transport Complex IVHydrogen PeroxidePeroxides

Identifiers

PMID24840065
PMCPMC4059527
OpenAlexW2044788603

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.