Evidence map›Paper›PMID 24838974›Full record

ArticleThe Plant cell2014

The Origin and Biosynthesis of the Benzenoid Moiety of Ubiquinone (Coenzyme Q) in Arabidopsis.

Anna Block, Joshua R Widhalm, Abdelhak Fatihi, Rebecca E Cahoon, Yashitola Wamboldt, Christian Elowsky, Sally A Mackenzie, Edgar B Cahoon, Clint Chapple, Natalia Dudareva and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
  2. Article
  3. Understanding coenzyme Q.Physiological reviews · 2024
    Review
  4. Review
  5. Review
  6. Biosynthesis, Deficiency, and Supplementation of Coenzyme Q.Antioxidants (Basel, Switzerland) · 2023
    Review
  7. Characterization ofMetabolites · 2023
    Article
  8. Article
  9. How plants synthesize coenzyme Q.Plant communications · 2022
    Review
  10. Inventory of ATP-binding cassette proteins in Lithospermum erythrorhizon as a model plant producing divergent secondary metabolites.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022
    Article
  11. Review
  12. Peroxisomal Proteome Mining of Sweet Pepper (Frontiers in plant science · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Anna BlockCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Joshua R WidhalmDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907.
Abdelhak FatihiCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Rebecca E CahoonCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Yashitola WamboldtCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Christian ElowskyCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Sally A MackenzieCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Edgar B CahoonCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588.
Clint ChappleDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907.
Natalia DudarevaDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907.
Gilles J BassetCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska 68588 gbasset2@unl.edu.
University of Nebraska–Lincoln · USPurdue University West Lafayette · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is not known how plants make the benzenoid ring of ubiquinone, a vital respiratory cofactor. Here, we demonstrate that Arabidopsis thaliana uses for that purpose two separate biosynthetic branches stemming from phenylalanine and tyrosine. Gene network modeling and characterization of T-DNA mutants indicated that acyl-activating enzyme encoded by At4g19010 contributes to the biosynthesis of ubiquinone specifically from phenylalanine. CoA ligase assays verified that At4g19010 prefers para-coumarate, ferulate, and caffeate as substrates. Feeding experiments demonstrated that the at4g19010 knockout cannot use para-coumarate for ubiquinone biosynthesis and that the supply of 4-hydroxybenzoate, the side-chain shortened version of para-coumarate, can bypass this blockage. Furthermore, a trans-cinnamate 4-hydroxylase mutant, which is impaired in the conversion of trans-cinnamate into para-coumarate, displayed similar defects in ubiquinone biosynthesis to that of the at4g19010 knockout. Green fluorescent protein fusion experiments demonstrated that At4g19010 occurs in peroxisomes, resulting in an elaborate biosynthetic architecture where phenylpropanoid intermediates have to be transported from the cytosol to peroxisomes and then to mitochondria where ubiquinone is assembled. Collectively, these results demonstrate that At4g19010 activates the propyl side chain of para-coumarate for its subsequent β-oxidative shortening. Evidence is shown that the peroxisomal ABCD transporter (PXA1) plays a critical role in this branch.

Identifiers

PMID24838974
PMCPMC4079360
OpenAlexW2113681544

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.